Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0326 ATGAAATCAGTGATAGCAACCTCATTTGATGTCTCCGGCGCATGTTTATCTTCACGTCCTTCCCTCCTTAATGCTTACCACACAACCAGCAGGCCTTCATCTATAGTGGCCATCAATTATCAAAAGGGATATAGTAGTAGAAGGATTCTTGTTGAACCCAAGTTTCCATTTCGGAGGGAAGCTGGTTTGAGTGGGAGCTTAGAAGCTGTTGGAGTTCCAACCTCGGTGCCGGTGCGTGTAGCACACGAGCTTCTTCTTGCTGGCCATCGCTATTTGGATGTCAGGACTCCAGAAGAGTTCCATGCAGGACATGCTCCTGGCGCAATTAACATACCTTACATGTTCAGAGTTGGATCAGGGATGACAAAAAACACCAACTTCGTTAAAGAGGTCTCGTCAGAGTTCAGAAAAGATGATGAAATTATTGTAGGGTGTCAGCTCGGTAAAAGGTCCATGATGGCTGCTACTGACTTATTAGCCGCTGGGTTCACCGGAGTAACGGATATAGCTGGTGGTTATGCGGCTTGGACCCAAAATAACCTTCCAACAGAACTGTGA 558 0.4642 MKSVIATSFDVSGACLSSRPSLLNAYHTTSRPSSIVAINYQKGYSSRRILVEPKFPFRREAGLSGSLEAVGVPTSVPVRVAHELLLAGHRYLDVRTPEEFHAGHAPGAINIPYMFRVGSGMTKNTNFVKEVSSEFRKDDEIIVGCQLGKRSMMAATDLLAAGFTGVTDIAGGYAAWTQNNLPTEL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0326 185 Gene3D - 65 184 IPR036873 -
Amo05g0326 185 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 4 184 - -
Amo05g0326 185 Pfam Rhodanese-like domain 91 178 IPR001763 -
Amo05g0326 185 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 71 183 IPR036873 -
Amo05g0326 185 CDD RHOD 92 176 - -
Amo05g0326 185 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 4 184 - -
Amo05g0326 185 ProSiteProfiles Rhodanese domain profile. 85 185 IPR001763 -
Amo05g0326 185 SMART rhod_4 75 182 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0326 Amo-Chr5 3959410 3961227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0326 75 182 Sulfurtransferasese or Rhodanese AT5G66170 48.182 1.37e-32 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0326 05 3959410 3961227 Amo01g0845 01 11661416 11663759 PCT