Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0305 ATGGCTTGCCTGAGCCGCCGCTGGGTCCCTAGTCCTGACATGCTCTCCGGAGAACACTTGTCCCACCACCACCACCACCACCACCACCATCACCACCGCATCCACGGGGGCGAAGGCGTTTTCGGTTCCGGCGACGAGGACGAGGGCTACTCCAAGAGCTGCACCTCTCTTCCTTCTTCTGCGTACCGGTTGGAGAAGGTTTTTCCCGTTTACGCCATGTGCGGGTCCGACCCGGAGTCTGCGTCCGTGTTAGACGGGTCTGACCCAGTTTGGGAGGCTGTTAAAGAAGAAGCGAAGTTGGAGGCAGAAAAGGAGCCAATCTTGAGCAGCTTCTTGTATGCAAGCATTCTATCGCATGATTGCTTGGAGCAAGCGTTGGCGTTTGTTATTGCAAACCGGCTCCAGAATCCTACCCTTTTGGCTACCCAGCTGATTGATATTTTTTGCAATGTGATCATGCATGACAAAGATATTCAACAATCCATTCGCCTTGATGTCCAGGCATTCAAAGATAGGGATCCTGCTTGTTTGTCATATTGCACAGCAATTTTGTATATGAAGGGTTACCATTCTCTGCAAGTTTATAGAGTAGCCCATGCATTATGGCACCAGGGACGCAAAGTTTTGGCCTTGGCTTTGCAAAGCCGAGTAAGTGAGGTTTTTGGAATTGATATTCATCCAGCTGCAAAAATTGGGGAGGGAATTTTATTAGATCATGGGACTGGCGTGGTTATTGGTGAAACTGCTGTTGTTGGAAACAGAGTTTCATTAATGCAAGGTGTAACATTAGGAGGCACGGGGAAGGGAACAGGTGATCGTCATCCCAAGGTAGGCGAAGGTGTGCTGATTGGTGCTAGTGCAACTATACTTGGGAATATAATAATTGGTGAAGGTTCAATGATAGCTGCTGGATCCCTGGTGTTAAAAGATGTCCCTCCCCACAGTGTTGTGGCAGGGATACCAGCAAATATTATTGGAGGTCTTCATGAGCATGACCCATCTTTAACCATGAAACATGATGCTACAAAGGATTTTTTTACAAAGTAG 1047 0.4804 MACLSRRWVPSPDMLSGEHLSHHHHHHHHHHHRIHGGEGVFGSGDEDEGYSKSCTSLPSSAYRLEKVFPVYAMCGSDPESASVLDGSDPVWEAVKEEAKLEAEKEPILSSFLYASILSHDCLEQALAFVIANRLQNPTLLATQLIDIFCNVIMHDKDIQQSIRLDVQAFKDRDPACLSYCTAILYMKGYHSLQVYRVAHALWHQGRKVLALALQSRVSEVFGIDIHPAAKIGEGILLDHGTGVVIGETAVVGNRVSLMQGVTLGGTGKGTGDRHPKVGEGVLIGASATILGNIIIGEGSMIAAGSLVLKDVPPHSVVAGIPANIIGGLHEHDPSLTMKHDATKDFFTK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0305 348 Pfam Serine acetyltransferase, N-terminal 90 193 IPR010493 GO:0005737|GO:0006535|GO:0009001
Amo05g0305 348 MobiDBLite consensus disorder prediction 21 35 - -
Amo05g0305 348 CDD LbH_SAT 221 321 IPR045304 -
Amo05g0305 348 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 283 311 IPR018357 GO:0016740
Amo05g0305 348 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 51 347 - -
Amo05g0305 348 MobiDBLite consensus disorder prediction 19 45 - -
Amo05g0305 348 Gene3D serine acetyltransferase, domain 1 74 223 IPR042122 -
Amo05g0305 348 Gene3D Hexapeptide repeat proteins 224 347 - -
Amo05g0305 348 PANTHER SERINE ACETYLTRANSFERASE 51 347 - -
Amo05g0305 348 TIGRFAM cysE: serine O-acetyltransferase 162 322 IPR005881 GO:0005737|GO:0006535|GO:0009001
Amo05g0305 348 Pfam Bacterial transferase hexapeptide (six repeats) 274 307 IPR001451 -
Amo05g0305 348 SMART SATase_N_2_a 90 194 IPR010493 GO:0005737|GO:0006535|GO:0009001
Amo05g0305 348 SUPERFAMILY Trimeric LpxA-like enzymes 87 338 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0305 Amo-Chr5 3772469 3776558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0305 64 346 Miscellaneous Gene Families AT2G17640 75.088 2.13e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0305 K00640 - gmx:100775449 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0305 05 3772469 3776558 Amo01g0921 01 12339240 12342130 PCT