Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0301 ATGGTGATTTCTGATGAGAACATCTCTAACTCAATCAACCCCACAAATCTCCAAGGAGGTTTAGATTATATGGATACAAAAAAAGCTGGGCAGAAGAATAGAAGAGCTTTAAGTGTTATCAATCAGAGTGTGGTGGAAAGTAGACATTACCCTTGCATTTTGAACAAAAGGGCATTTGCAGAAAAACATGAAGTTTGTGAGAAAAAGCAGGTGGATCCAGTGCACCGACCCATCACAAGGAGGTTTGCTGCAAAAATTGCTACCACACAACAGTCTCGGAATGAGGAAAACAAAAGGAATACAAACAAATCCAATCAGTTTGGAGAGTATATACTCATTGACGATGAACATAAGTCAGTGGAAGATCAGCCGGTGCCAATGTCTCTGGAGCAAACAGGGCAATTGGACAATGATTCAGATCAGATGGAGGAAGTTGAGATGGAGGATATAGACGTTGAAGAGCCCCTTGTGGACATTGATAGTGGTGATGCAAATAATACTCTTGCAGTTGTGGACTATATTGAAGAACTTTATATCCATTACAGAAAAATGGAGAGGACTAGTTGTGCCTCGCCAAATTATATGGCGCAACAATTTGACATTAACGAAAGGATGAGGGCTATACTGATTGACTGGCTAATTGAGGTGCATGATAAGTTTGAGCTCATGCATGAAACATTGTTCCTTACAGTTAACCTCATAGATAGATTCTTGGAAAAGCAGACAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTAGTTGCAATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTGCCTGTTGTTAGTGATTTGATCCTTATATCAGACAAGGCATATACAAGGAATGAAGTTCTGGATATGGAGAAGTTGATGCTGAACACATTGCACTTTAACATGTCTGTTCCAACAGCATATGTTTTCATTAGAAGGTTCCTAAAGGCAGCACAAGCAGACAGAAAGCTTGAGCTACTAGCTTTCTTCTTGGTAGAGCTATCTCTAGTGGAGTATGAGATGCTTAAGTTCTCGCCATCTTTGCTAGCTGCAGCTGCAGTTTATACAGCTCAATGCACAGTTTTCGGCTTCAGACAGTGGAGCAAGACATGTGAATGGCATACCAATTACACAGAAGAGCAATTATTAGAGTGCTCGAGTTTAATGGTTGGTTTCCACCAGAAGGCAGGGTCAGGGAAACTTACAGGGGTGCATAGGAAGTACTGTTCTTCAAAGCACAACTACACTGCAAAATGTGAAGCAGCAAGTTTTCTTCTTGATAACTCATTGTTGTAG 1293 0.4084 MVISDENISNSINPTNLQGGLDYMDTKKAGQKNRRALSVINQSVVESRHYPCILNKRAFAEKHEVCEKKQVDPVHRPITRRFAAKIATTQQSRNEENKRNTNKSNQFGEYILIDDEHKSVEDQPVPMSLEQTGQLDNDSDQMEEVEMEDIDVEEPLVDIDSGDANNTLAVVDYIEELYIHYRKMERTSCASPNYMAQQFDINERMRAILIDWLIEVHDKFELMHETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVSDLILISDKAYTRNEVLDMEKLMLNTLHFNMSVPTAYVFIRRFLKAAQADRKLELLAFFLVELSLVEYEMLKFSPSLLAAAAVYTAQCTVFGFRQWSKTCEWHTNYTEEQLLECSSLMVGFHQKAGSGKLTGVHRKYCSSKHNYTAKCEAASFLLDNSLL* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0301 430 ProSitePatterns Cyclins signature. 206 237 IPR006671 -
Amo05g0301 430 MobiDBLite consensus disorder prediction 1 20 - -
Amo05g0301 430 Pfam Cyclin, N-terminal domain 178 302 IPR006671 -
Amo05g0301 430 SUPERFAMILY Cyclin-like 303 420 IPR036915 -
Amo05g0301 430 Gene3D - 190 302 - -
Amo05g0301 430 PANTHER CYCLIN-B2-1 23 424 - -
Amo05g0301 430 SUPERFAMILY Cyclin-like 165 301 IPR036915 -
Amo05g0301 430 SMART Cyclin_C_2 304 421 IPR004367 -
Amo05g0301 430 SMART cyclin_7 308 390 IPR013763 -
Amo05g0301 430 SMART cyclin_7 211 295 IPR013763 -
Amo05g0301 430 MobiDBLite consensus disorder prediction 86 106 - -
Amo05g0301 430 MobiDBLite consensus disorder prediction 1 23 - -
Amo05g0301 430 PIRSF Cyclin_A_B_D_E 7 429 IPR039361 -
Amo05g0301 430 CDD CYCLIN 205 294 IPR013763 -
Amo05g0301 430 Gene3D - 177 416 - -
Amo05g0301 430 Pfam Cyclin, C-terminal domain 304 418 IPR004367 -
Amo05g0301 430 CDD CYCLIN 302 389 IPR013763 -
Amo05g0301 430 PANTHER CYCLINS 23 424 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0301 Amo-Chr5 3738397 3742281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0301 1 425 Core Cell Cycle Gene Families AT1G20610 57.176 2.56e-173 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0301 K21777 - gmx:100779889 655.981