Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0293 ATGCAGATACAGAGACGCCTTGCACAAAATCGAGAGGTTGCTCGTAAGAGTCGTTTGCGCAAAAAGGCCTATGTACAGCAACTAGAATCATGTTGTGTGAAGCTAATGCAGTTAGAGCAAGAGGTTGATTATGCAAAACAACAAGTGAAGTGA 153 0.4248 MQIQRRLAQNREVARKSRLRKKAYVQQLESCCVKLMQLEQEVDYAKQQVK* 51
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0293 50 SUPERFAMILY Leucine zipper domain 4 46 IPR046347 GO:0003700|GO:0006355
Amo05g0293 50 PANTHER TRANSCRIPTION FACTOR TGA10 3 47 - -
Amo05g0293 50 Pfam bZIP transcription factor 4 38 IPR004827 GO:0003700|GO:0006355
Amo05g0293 50 Gene3D - 2 50 - -
Amo05g0293 50 PANTHER TRANSCRIPTION FACTOR TGA9 3 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0293 Amo-Chr5 3672141 3672386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0293 2 48 Calmodulin-binding Proteins AT5G10030 76.596 1.80e-17 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo05g0293 bZIP_1 4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0293 K14431 - adu:110281643 94.3597