Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0267 ATGGCACCAGGGCCTGGTTGCACATCTCAGACGACTATGTTGAGTGGTGGTGGCGGTGTCGGGTGTGTCGATAACAGTACTAGTAATGAGTCTGCCATGGAGGATCAAAATGGTGACACAGTTGGGAATTTGATTCACAACATTGGGAAGCCTCCAAGGGACCATTCTGTTATGAGACACTGCACCAGCTCTTCATGGTTGATTGAACCGGAATCAGATATTATGATTGTAGGATTGAAAACAACTAGTGAGGAAAAATCAGAATTTTCACCAAAATTACGGTCTGGAAGTTGTTCTGAGAAAGGACCAAAGCAGTACATGGAGGATGAGTTCATCTGTGTTGATATTCTCCGAGAACATACTGGTCCATCAGTGAACCTTCCTTCTCCAGCAGCATTTTATGGGGTATTTGATGGGCATGGTGGCATTGATGCAGCATCATTTACAAGAAAGAACATCCTTAAGTTTATAATTGAAGATTCTCATTTCCCATCTGGAATCAAGAAAGCTGTAAATAGTGCTTTTGTGAAGGCTGATCATGCATTTAGGGATGCTAGTTCTCTTGATAGTTCTTCCGGCACCACCGCACTAATCGCCATTGTCCTGGGAAGGGACATGCTAATTGGGAATGCAGGGGATTCAAGAGCGGTTTTAGGGAAAAGAGGCAGAGCCATTGAACTCTCCAAAGACCATAAACCAAATTGCACATCAGAAAGACTAAGAATTGAGAAACTTGGTGGTGTGATCTACGACGGATACCTCAACGGCCAACTGTCAGTGGCTCGAGCCCTGGGAGACTGGCACATCAAAGGGTCTAAAGGGTCCAAGAGTCCCCTGAGCTCAGAGCCAGAGCTAGAGGAGATTGTGTTGACAGAAGAAGATGAGTTCTTGATAATGGGGTGTGATGGACTTTGGGATGTGATGAGTAGCCAGTGTGCTGTGACAATGGTTAGGAGGGAGCTGATGCAGCACAATGATCCAACAGAATGTGCGAAAGCGCTTGTCGCGGAGGCAATCCAACGCAACACTTGTGACAATCTAACAGTTGTGGTTGTTTGTTTCTCTTTGGATCCTCCTCCAAAGATTGAGATTCCTAGAGCTCATAGGAGAAGGAGCATTTCAGCTGAAGGCCTTGATCTTCTCAAGGGTGTCTTGAATGGTAGATAG 1167 0.455 MAPGPGCTSQTTMLSGGGGVGCVDNSTSNESAMEDQNGDTVGNLIHNIGKPPRDHSVMRHCTSSSWLIEPESDIMIVGLKTTSEEKSEFSPKLRSGSCSEKGPKQYMEDEFICVDILREHTGPSVNLPSPAAFYGVFDGHGGIDAASFTRKNILKFIIEDSHFPSGIKKAVNSAFVKADHAFRDASSLDSSSGTTALIAIVLGRDMLIGNAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPTECAKALVAEAIQRNTCDNLTVVVVCFSLDPPPKIEIPRAHRRRSISAEGLDLLKGVLNGR* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0267 388 SUPERFAMILY PP2C-like 86 354 IPR036457 -
Amo05g0267 388 SMART PP2C_SIG_2 112 354 IPR001932 -
Amo05g0267 388 CDD PP2Cc 94 354 IPR001932 -
Amo05g0267 388 Pfam Protein phosphatase 2C 95 346 IPR001932 -
Amo05g0267 388 MobiDBLite consensus disorder prediction 1 38 - -
Amo05g0267 388 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 28 376 - -
Amo05g0267 388 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Amo05g0267 388 ProSiteProfiles PPM-type phosphatase domain profile. 94 354 IPR001932 -
Amo05g0267 388 PANTHER PROTEIN PHOSPHATASE 2C 28 376 IPR015655 GO:0004722|GO:0006470
Amo05g0267 388 Gene3D - 76 357 IPR036457 -
Amo05g0267 388 SMART PP2C_4 84 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0267 Amo-Chr5 3330381 3334713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0267 78 386 PP2C-type Phosphatase Gene Family AT3G51470 77.994 1.21e-178 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0267 K14803 - gmx:100786416 592.038