Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo05g0264 | ATGAAAATTTGTCTCTTCATCTTCCATTTCTTCGTGTTGTCGATTCTCGCAGCTCAAATATCCTTCTCAGATTCACACGCCTCTGACCTCTCTCTTCTCCACCACCATACCAACCGTCAACCTGCTACGGGCCTCATTGCAGCCCTAGATGGCACTCTCTATCTGCTCGACACTGATTCCGGCAGGGTAATTTGGTCATTCTCCACCGGTTCCCCCATCTACCATTCCTACCTGGCACCTCTCAATTCCGCCAATGAATCTGGACTCATCGAATGCGGTGATGATTGGGAACTCATCCTTCATCACAACCACTTTGGTAAAACGAGGCTCTCGGAATCTATTGCTGATTATGTTGCGGATACGCCTGTTATGTCAGAAGATGGGGCAGTTGTTCTTGGATCCAAAAGAACAACTGTCTTTGAAGTTGATGCTAAAACCGGAAGGCTTGTAAGAAGTTATACCACTGCAGCCTTTGATGATTCGTCCGCCGCCGGCTGGAGTGATGACAGGAAGAATGTGGCTACTGACATTGGTACAAGCAGTAGTGAGCTTGCTGATCCTGCACAGCTTAATCCGCCGGAGTTTTTACTCAAGATATTTAGGACTGATTATCTTTTGCAATCTGTTGGTCCTGGATCTGGAATGGTTTTGTGGACCATGAAAGTAGCTGAATTTAAGGCTGTATTACATTGCCAACATGATGAGTATCCTTCTGACCGGGTGTCATTCGAGGCAGGAGGTCAATATGCTTTCGACAGTGGCTTACGTTTTGCTATGCCGTATGCATGTCATGACAGAAAACTAAAAGATGTCTATCGCCAAAGGAAGAATTTTCTGCTAGAACATGGCAACTCTGAAAGATTATCCGAGGGTTATCAAGAGTTTGATATGCTCCCAACCCCTTCTTCAGAACTGATGCTTCCATTGCAACCTAACAAAAATAGGGTTCCCCATGGTCCTAATAGTAAAATGATGCTTCCTGGGGCCGTGCTAAATCATTTGCCTGCTTTGCCACCAAAAATCAACTATGATAACAATGATCATGCAGTAATGCTCCACCGGTTTCCTATGGATATGGCTGGACCTGGTAAAATTCATGTGAGCAAGGGGATTGAATGGTCAACAACATCAGCTCTTATATTGTTTATAGGATTTATCCTCTGCATTTTGATCTTTTGCTTCTGCCTTAAGAAAAAGAGAGTGCAGAAGGACCAAAACATTGAGGCAATTTTAAAAAGTCCTTCTTCTAAGAAAAAGAGAGCACGTAAGTCTGGAAGGAATGCCATCGTTGTTGACAAACAGGATAGGAATTCATTGCCAGCTGAGGAGGATATACTGACAAATAATGTTGATGGACGGAAGATTGGTAAACTAATTGTACTAAACAAAGAAATTGCTAAGGGTAGCAATGGTACCATTGTTCTGGAGGGGATATATGAAGGTCGGGAAGTTGCTGTCAAACGTCTTGTTCAAGCTCATCATGATGTAGCCAGCAAAGAAATCCAAAACCTTATTGCATCTGATTGCCATCCAAACATTGTTCGATGGTATGGGGTCGAATATGATAATGATTTTGTTTATCTTGCTTTGGAGCGTTGTATATGCAACTTGGATGATTTGATTCAAAATTACTCTGATATATCAGAAAACCCAGTGCATAGCAAGGATCAAGGTTCTAAGATTGTTATAAAGGCTCAGGTGGAGACAGGGAAGGATGACGTGCAATATCTTTGGAAAGCAAGTGGCCATCCATCATCGCTATTACTTAAACTAATGAGGGATGTAATTTCTGGGCTTGCTCATTTGCATGAACTAGGAATAATACACCGGGATTTGAAACCCCAAAATGTTTTGATAACCAAAGAAAGATCACTATGTGCAAAGCTTTCTGATATGGGAATTAGCAAACGCCTTCTTGAAGATATGTCTACGTTGGGTCATAGTGTTACTGGATGTGGGAGTTCAGGGTGGCAGGCACCAGAGCAGCTTGTTCAAGGACGCCAATCACGAGCTTTAGATTTGTTTAGTTTGGGATGTGTCCTATTTTTCTGTATGACTGGGGGAAGACATCCATTTGGAGAGCGCCTTGAGCGCGATGTTAATATTCTAAAAAATCGAAAGGATCTCTTTTTAATAGAGTCCATTCCAGAGGCAGAGGACCTTATCTCTCGTTTATTAAACCCTGATCCGAATTTAAGGCCAAAGGCAATTGAAGTGTTGCACCATCCTCTTTTCTGGAGTTCTGAGATGAGACTTTCATTTCTTCGAGACGCCAGTGATAGGGTGGAACTTGAGGACAGAGAGACTGATTCTGATCTTCTTAGGACATTAGAAAGCATTGCACCAATGGCTTTAGGTGCAAAATGGGACGAAAAGATGGAACCGGCTTTCATTACTAATATTGGTCGTTACAGAAGATATAAATATGACAGTGTTCGAGACTTATTAAGGGTCATGAGAAACAAGCTAAATCATTATAGAGAATTACCTCAAGAAATTCAGGAACTTGTAGGATCTGTTCCAGAAGGATTCAATGACTATTTTGCAAGTCGGTTCCCAAGGCTCTTGATTGAAGTATACAGAGTTATATACGAATATTGCAAGGAAGATCAATGTTTTCAAAGGTATTTTAGAGACAATTAG | 2643 | 0.4185 | MKICLFIFHFFVLSILAAQISFSDSHASDLSLLHHHTNRQPATGLIAALDGTLYLLDTDSGRVIWSFSTGSPIYHSYLAPLNSANESGLIECGDDWELILHHNHFGKTRLSESIADYVADTPVMSEDGAVVLGSKRTTVFEVDAKTGRLVRSYTTAAFDDSSAAGWSDDRKNVATDIGTSSSELADPAQLNPPEFLLKIFRTDYLLQSVGPGSGMVLWTMKVAEFKAVLHCQHDEYPSDRVSFEAGGQYAFDSGLRFAMPYACHDRKLKDVYRQRKNFLLEHGNSERLSEGYQEFDMLPTPSSELMLPLQPNKNRVPHGPNSKMMLPGAVLNHLPALPPKINYDNNDHAVMLHRFPMDMAGPGKIHVSKGIEWSTTSALILFIGFILCILIFCFCLKKKRVQKDQNIEAILKSPSSKKKRARKSGRNAIVVDKQDRNSLPAEEDILTNNVDGRKIGKLIVLNKEIAKGSNGTIVLEGIYEGREVAVKRLVQAHHDVASKEIQNLIASDCHPNIVRWYGVEYDNDFVYLALERCICNLDDLIQNYSDISENPVHSKDQGSKIVIKAQVETGKDDVQYLWKASGHPSSLLLKLMRDVISGLAHLHELGIIHRDLKPQNVLITKERSLCAKLSDMGISKRLLEDMSTLGHSVTGCGSSGWQAPEQLVQGRQSRALDLFSLGCVLFFCMTGGRHPFGERLERDVNILKNRKDLFLIESIPEAEDLISRLLNPDPNLRPKAIEVLHHPLFWSSEMRLSFLRDASDRVELEDRETDSDLLRTLESIAPMALGAKWDEKMEPAFITNIGRYRRYKYDSVRDLLRVMRNKLNHYRELPQEIQELVGSVPEGFNDYFASRFPRLLIEVYRVIYEYCKEDQCFQRYFRDN* | 881 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo05g0264 | 880 | SMART | ire1_9 | 122 | 154 | IPR018391 | - | |
Amo05g0264 | 880 | SMART | ire1_9 | 37 | 68 | IPR018391 | - | |
Amo05g0264 | 880 | SUPERFAMILY | Protein kinase-like (PK-like) | 461 | 749 | IPR011009 | - | |
Amo05g0264 | 880 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 607 | 619 | IPR008271 | GO:0004672|GO:0006468 | |
Amo05g0264 | 880 | PANTHER | SERINE/THREONINE KINASE DOMAIN PROTEIN | 6 | 877 | - | - | |
Amo05g0264 | 880 | Pfam | Ribonuclease 2-5A | 751 | 877 | IPR010513 | GO:0004540|GO:0006397 | |
Amo05g0264 | 880 | Pfam | Protein kinase domain | 462 | 745 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo05g0264 | 880 | SMART | serkin_6 | 459 | 745 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo05g0264 | 880 | Gene3D | - | 38 | 250 | IPR015943 | GO:0005515 | |
Amo05g0264 | 880 | Gene3D | Phosphorylase Kinase; domain 1 | 446 | 531 | - | - | |
Amo05g0264 | 880 | PANTHER | IRE1-RELATED | 6 | 877 | IPR045133 | GO:0004521|GO:0004674|GO:0030968 | |
Amo05g0264 | 880 | ProSiteProfiles | KEN domain profile. | 748 | 879 | IPR010513 | GO:0004540|GO:0006397 | |
Amo05g0264 | 880 | SUPERFAMILY | Quinoprotein alcohol dehydrogenase-like | 48 | 161 | IPR011047 | - | |
Amo05g0264 | 880 | SMART | PGNneu | 810 | 864 | - | - | |
Amo05g0264 | 880 | Pfam | PQQ enzyme repeat | 48 | 74 | IPR002372 | - | |
Amo05g0264 | 880 | Gene3D | Transferase(Phosphotransferase) domain 1 | 579 | 747 | - | - | |
Amo05g0264 | 880 | Gene3D | KEN domain | 748 | 880 | IPR038357 | - | |
Amo05g0264 | 880 | CDD | RNase_Ire1 | 749 | 877 | - | - | |
Amo05g0264 | 880 | ProSiteProfiles | Protein kinase domain profile. | 459 | 745 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo05g0264 | Amo-Chr5 | 3305893 | 3310298 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo05g0264 | 485 | 744 | MAP Kinase Kinase Kinase | AT3G06030 | 26.515 | 6.25e-21 | 96.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | IRE1 | Amo05g0264 | Pkinase | 1.5e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo05g0264 | K08852 | - | gmx:102661527 | 1097.03 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Amo05g0264 | 05 | 3305893 | 3310298 | Amo01g0979 | 01 | 12895456 | 12900825 | PCT | |
Amo01g0979 | 01 | 12895456 | 12900825 | Amo05g0264 | 05 | 3305893 | 3310298 | PCT |