Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0253 ATGGCCATGGAAGGAAGAAGAATCTCTGAGGAATTGAGCCCCAGGTATTATGCTCTTTGTGCTGTTGGCGGAATGCTCAGTGCTGGCACTACCCATATTGCTCTAACTCCTCTTGATGTCTTGAAGGTCAACATGCAGGTGTACCCTGTGAAGTATTACAGCATTTCCAAGTGCTTTTCTTCCTTACTGAGGGAACAAGGGCCTTCTGCCCTTTGGAGGGGATGGACTGGCAAGTTCTTTGGCTACGGCGCACAGGGTGGCTGTAGGTTTGGTCTCTATGAATATTTTAAGGGGGTTTATTCCAATGTGTTCGTAGACCAGAACAGGAACTTTGTTTACTTTCTCAGTAGTGCGTCTGCTGAAATGTTTGCCAATCTAGCATTGTGTCCATTTGAAGCTGTAAAAGTGAGGGTTCAAGCGCAACCATGCTTTGCTAAGGGCTTGCACGATGGCTTTCCGAAGTTATATGCAGCAGAAGGCACACGAGGATTCTACCGTGGACTTTTTCCACTTTTGGTTTCCATGGTTATGTTTGCAACATTTGAGCATTCCGTTGATTTTTTGTATCGTAATGTTGCTAAAAGAAGAAAGGAAGATTGTTCTATAGCTCAACAGCTTGGTGTGACATGTATAGCTGGATATGCAGCCGGATCTGTTGGTAGTTTCATTTCCAATCCTGCTGACAATATTGTATCCTCTCTCTATAACAGAAAGGCCGATAGTTTCATGCTGGCTATCAGAAAAATTGGGTTTGCCAATCTATTTACCAGGAGCCTTCCTATTCGACTTTTGCTTGTTGGTCCCTCGATAACTTTGCAATGGTTTTTCTATGACACCATCAAAGTTTTAGGCGGACTGCCGACTAGTGGCGAAGTTGCAACCGACTTGAGAGATGATGCAAGCTAG 906 0.4437 MAMEGRRISEELSPRYYALCAVGGMLSAGTTHIALTPLDVLKVNMQVYPVKYYSISKCFSSLLREQGPSALWRGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVFVDQNRNFVYFLSSASAEMFANLALCPFEAVKVRVQAQPCFAKGLHDGFPKLYAAEGTRGFYRGLFPLLVSMVMFATFEHSVDFLYRNVAKRRKEDCSIAQQLGVTCIAGYAAGSVGSFISNPADNIVSSLYNRKADSFMLAIRKIGFANLFTRSLPIRLLLVGPSITLQWFFYDTIKVLGGLPTSGEVATDLRDDAS* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0253 301 SUPERFAMILY Mitochondrial carrier 16 279 IPR023395 -
Amo05g0253 301 Pfam Mitochondrial carrier protein 21 101 IPR018108 -
Amo05g0253 301 Pfam Mitochondrial carrier protein 109 190 IPR018108 -
Amo05g0253 301 Gene3D Mitochondrial carrier domain 21 284 IPR023395 -
Amo05g0253 301 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 299 IPR044677 GO:0005315|GO:1990547
Amo05g0253 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 283 IPR018108 -
Amo05g0253 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 99 IPR018108 -
Amo05g0253 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 192 IPR018108 -
Amo05g0253 301 PANTHER PHOSPHATE CARRIER PROTEIN 4 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0253 Amo-Chr5 3230994 3233991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0253 7 292 Chloroplast and Mitochondria Gene Families AT2G17270 67.123 5.80e-148 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0253 K15102 - gmx:100788561 535.028