Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo05g0235 | ATGGTGTGGGTGGAGTACGATGGTGTAAAGAAGGAGATGGAGGTGTACATGGCGGAGAGTCAGTATCATTACGATGGCCCCATAGTAGCGGAAAAGCCATCGAAGGCAGTATTGAGTTCGCATCTAGACCTGAAAGGTTTGGTGAATGACATGTCATATTTTGGGTTCTCGGCTTCCACCGGCAATTATTACGAGTTGAACGCAATATTTAGATGGAACTTGTCGGTGGAGGTTCTACCTAATTATAGTATGAGTAGTGCAAGAAATGATAATTACTGGTGGAAGACCGGCGTAGGTGTTGGTGTGGGAGCACCTCTTTTGGCTTTGCTTATTACCGGTGTTATGCATTTCCTACGCAGGAAGATAAGGGAAAGTGGATCGGACCCGAAATTGTTGAGCACACTGAAGAGATTGCCAGGGACTCCCAGCGAGTTCAGGTTCCGGGAACTCAAGATTGCCACCAACAATTTCCATGACAGCAACAAGCTTGGTCAAGGTGGCTTTGGCATCGTTTACAGAGGAACACTGCCGAAGGAGAAGCTGCAAATGGCAGTCAAGAAGTTCTCAAGGGACAGCATCAAAGGCATCAGTGATTTCTTGGCTGAGCTCACCATCATCAACTGTCTCCGTTACAAGAACCTTGTGCGCTTACTAGGATGGTGCCACAACAAAGGGACACTACTGTTGGTATACGAATACATGCCTAATGGAAGTTTGGATAACCACATTTTCTTTGAGAAAGGGACTACCAAAACCCCACTAAGTTGGAGTCTAAGATATAAGATCTTATTAGACGTGGCTTTTGCACTAAATTACCTGCACAATGAGTATGATCAAAAAGTGGTGCATAGAGATCTCAAAGCAAGCAACATTATGCTTGATTCCGACTTCAATGCACGATTAGGTGACTTTGGCTTAGCTCGAACGCTTGACAACGAGAAAACCTCGTATGCCGAGGGTGTACCAGCAGGGACTCGGGGCTACATTGCGCCGGAGTGCCTTTACACCGGTAAGGCCACGTGCGAGTCCGATGTGTATGGATTTGGAGCTGTGTTACTCGAGGTAGTGTGTGGTCAACGACCATGGGCAAAGATTGGGGGGCATCATTTCTTGGTGGGCTGGGTTTGGCAGTTACATGGTGAAGGGAAGATTCTAGAAGCAGTGGACCCCAGACTTGGGAATGATTTTGTGGCTGAAGAGGCAGAGAGGATCTTGACATTGGGGCTAGTATGCTCTCACCCCATGGCTCCTGAGAGGCCCAAGATGCAAACAATTGTTCAGATCATATCAGGGTCAGGTTCCACCCTTCAAGCCACCTTTTGTGTGGCCTGCCGTGGATCAAGGCCCTACAGCTGCCACTTTAGAGTGCTCTCCCATTAA | 1380 | 0.4775 | MVWVEYDGVKKEMEVYMAESQYHYDGPIVAEKPSKAVLSSHLDLKGLVNDMSYFGFSASTGNYYELNAIFRWNLSVEVLPNYSMSSARNDNYWWKTGVGVGVGAPLLALLITGVMHFLRRKIRESGSDPKLLSTLKRLPGTPSEFRFRELKIATNNFHDSNKLGQGGFGIVYRGTLPKEKLQMAVKKFSRDSIKGISDFLAELTIINCLRYKNLVRLLGWCHNKGTLLLVYEYMPNGSLDNHIFFEKGTTKTPLSWSLRYKILLDVAFALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARTLDNEKTSYAEGVPAGTRGYIAPECLYTGKATCESDVYGFGAVLLEVVCGQRPWAKIGGHHFLVGWVWQLHGEGKILEAVDPRLGNDFVAEEAERILTLGLVCSHPMAPERPKMQTIVQIISGSGSTLQATFCVACRGSRPYSCHFRVLSH* | 460 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo05g0235 | 459 | SMART | serkin_6 | 157 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo05g0235 | 459 | PANTHER | - | 2 | 439 | - | - | |
Amo05g0235 | 459 | Gene3D | Transferase(Phosphotransferase) domain 1 | 234 | 439 | - | - | |
Amo05g0235 | 459 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 281 | 293 | IPR008271 | GO:0004672|GO:0006468 | |
Amo05g0235 | 459 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 2 | 178 | IPR013320 | - | |
Amo05g0235 | 459 | ProSitePatterns | Protein kinases ATP-binding region signature. | 163 | 187 | IPR017441 | GO:0005524 | |
Amo05g0235 | 459 | Pfam | Legume lectin domain | 2 | 77 | IPR001220 | GO:0030246 | |
Amo05g0235 | 459 | Gene3D | Phosphorylase Kinase; domain 1 | 142 | 233 | - | - | |
Amo05g0235 | 459 | ProSiteProfiles | Protein kinase domain profile. | 157 | 440 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo05g0235 | 459 | Pfam | Protein kinase domain | 157 | 387 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo05g0235 | 459 | Gene3D | - | 1 | 78 | - | - | |
Amo05g0235 | 459 | PANTHER | L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED | 2 | 439 | - | - | |
Amo05g0235 | 459 | SUPERFAMILY | Protein kinase-like (PK-like) | 138 | 428 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo05g0235 | Amo-Chr5 | 3025599 | 3028144 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo05g0235 | 3 | 430 | Receptor kinase-like Gene Family | AT5G55830 | 41.814 | 6.48e-106 | 327 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Amo05g0235 | Pkinase | 9.4e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo05g0235 | - | - | gmx:100784558 | 564.303 |