Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0223 CCACTGTTACAATCAAACCAAATCAAAACCGCCAACAACCACCATCCCATCTTCTTCTTCTTTTCTTTGTCTGCGAGGTGTTTGTCAGAATTCCACAGAGAGCGAGAAGAAAAGGTGGGTTTGCGTACACGGCCCCCAATCACAAAGCGCCTATTGCTGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATGGGTTTAAGCTATACTAATCCAACATATGCTTCTGCCACGCAGCCAGCAATTCCAGTCTTTACGTTTCTGTTTACTGTAATGATGGGTACAGAAAGAGTAAACTTGCTAAGATATGAAGGGATTGCAAAGATTGGAGGAACTCTCATCTGTGTTTTTGGTGCTGTATTGATGGTTTTGTATCGAGGTCCGGCTCTGATAGGATATTCAGATCTAGACCATGTAGCACTAACTGAAATTAGTGCCAGAGGTCAGCCAGAGCCAGCTGGATGGTTAATGGATGGTTTGCAAGATTTTGGACTAGATCGATTTCATATTGGGGTTTTGTGTTTGATAGCAAACTGCATGTGCATGGCTGCTTTTTTGGCCCTTCAGGCACCATTATTGAATAAGTTTCATGCACACATATCTCTCACAGCATATTCGTACTTTTTTGGAGCTGTACTGATGGTGATATCATCGATATTCATGACTGATCCATCGGCTGACTGGACTTTGACGCGGTCAGAAGTAGTTGCTGTTATTTATGCTGGAGTTATTGCATCTGCCCTTAATTATGGAATCATTACATGGAGCAACAAGATTCTGGGGCCAGCTTTGGTTTCCCTTTACAATCCCCTCCAACCAGCATTTTCTACCCTTCTGTCCCTAATCTTCCTTGGAAGTCCAATTTACTTGGGCAGTGTTTGTGAGATGGCAACTGGTTCAGGATCAATTATATGGAAGACACAGTTGGCCATGTTAATGGCACCCCTAATCTATGGAGGTTACAATGTTGTCACCAAAGTGGCACTCAATGATGGTGTCAACCAGCTTGTCTTCTGTGTCTTCAGGGATCTCATTGCCCTTTCTGTTCTTGCTCCTGTTGCTTATTTCCATGAAAAGCATATGCGACCACCCATTACTAAGAAGCTATTAATGTCATTCTTCTTGCTTGGATCACTTGGGATATTTGCCAACCAGCTTCTGTTTCTTATTGGTTTAAAGTATACCAATGCAACATATGCTGCTGCCACACAGCCAGCCATTCCTGTCTTTACATTTCTGTTTTCTGCAATAATGGGGGTAGAAAAAGTGAACTTGCTAAGATATGAAGGGTGGGCAAAGGTTGGAGGGACTATTATCTGTGTCTTTGGTGCCTTGTTGATGGTGTTCTATCGCGGTCCAGTTGTGATAGGAAATGAAGAAATAGTAATGAAAAGTGCATCTCAAACTGAGCCATCTGGATGGTTAATTGATGGTTTGCAACATATAGGATTTGATCAATTCAGTCTTGGTGTTATGTGCTTAATAGGTAACTGCATGTGCATGGGTGCTTATCTAGCCATTCAGGCACCGCTATTGAGAAAGTACCCCACAAATATATCTCTCACAGCATATTCCTACTTCTTTGGAACTGTATTAATGGTGATAGTATCAATGTTTATGACTAATGGGATTACTGACTGGGCTCTAACGGGGTCCGAAATTCTTGCTGGAGTTCTTGCATCTGCCCTTGGTTATGCACTTATTACATGGAGCAGTAAGATCTTGGGACCAACCATGGTTTCCCTATATATCTCCCTTCAACCTGCATGTGCTACTATCCTTTCCCTAATTTTTCTTGGAAGTGCTGTCTACCTGGGAAGGGGTGGTGAGACATGGAAGGCACAGTTGACCATGTCAATGGTGCCCCTAATCTATGGAGCATACCCTGTCATCACAAAAGTTGCACTCAATGATGGAGTCAACCAACTAGTCTTCTGTGTCTACAGAGTTCTCATTGGCTTTTTCGTCCTTTCTCCTTTTGCTTATTTCCTAGAGAGGCAGGCGCGACCGCCCGTTACTAAGCACCTACTCATGTCATTCTTCTTGCTTGGATTACTTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTCTAAACTTGACCAATCCAACATATGCAGCTGCCACTCAGCCAGCCATTCCAGTCTTAACATTTATGTTTTCTGCAATCATGGGCACAGAGAAAGTGAACTTGCTAAGATATGAAGGTGTGGCAAAGGTTGGAGGAACTATTATCTGTGTCTCTGGAGCCATATCAATGGTGTTGTATCCCGGTCCAGTTGTTATAGGAAATCCTGAAACAGGAATGGAGCATGTATCACAGAATCCATCTGGGTTGAAGGATGTAGGATTCGACCAATTCCAACTTGGGGTTATCTGCATAATAGGGAATTGCATGTGCATGGCAGGTTATCTATCAATTCAGGCAAAATTGTTGAAAAAGTACCCCACAAACCTGTCCCTCACAGCATATTCCTACTTCTTTGGAACTGTATTAATGGTGATAGTATCGATTTTCATGACAGACGGGATAACTGACTGGACTTTGACACAGTCAGAAATACTTGCTGTTCTTTATGCTGGAATTATTGCATCTGCTCTTGGTTATGGACTCATAACATGGTCCAACAAGATTTTGGGGCCAACTATGGTTTCCTTATATAACTCCCTTCAACCTGCATTCGCTACCCTGCTGTCCCTAATTTTCCTTGGAAGTCCTGTTTACTTGGGAAGAAATGCCAAGAAAGTGTTGCTATAA 2781 0.4247 PLLQSNQIKTANNHHPIFFFFSLSARCLSEFHREREEKVGLRTRPPITKRLLLSFFFLGLTGIFGNQLLFLMGLSYTNPTYASATQPAIPVFTFLFTVMMGTERVNLLRYEGIAKIGGTLICVFGAVLMVLYRGPALIGYSDLDHVALTEISARGQPEPAGWLMDGLQDFGLDRFHIGVLCLIANCMCMAAFLALQAPLLNKFHAHISLTAYSYFFGAVLMVISSIFMTDPSADWTLTRSEVVAVIYAGVIASALNYGIITWSNKILGPALVSLYNPLQPAFSTLLSLIFLGSPIYLGSVCEMATGSGSIIWKTQLAMLMAPLIYGGYNVVTKVALNDGVNQLVFCVFRDLIALSVLAPVAYFHEKHMRPPITKKLLMSFFLLGSLGIFANQLLFLIGLKYTNATYAAATQPAIPVFTFLFSAIMGVEKVNLLRYEGWAKVGGTIICVFGALLMVFYRGPVVIGNEEIVMKSASQTEPSGWLIDGLQHIGFDQFSLGVMCLIGNCMCMGAYLAIQAPLLRKYPTNISLTAYSYFFGTVLMVIVSMFMTNGITDWALTGSEILAGVLASALGYALITWSSKILGPTMVSLYISLQPACATILSLIFLGSAVYLGRGGETWKAQLTMSMVPLIYGAYPVITKVALNDGVNQLVFCVYRVLIGFFVLSPFAYFLERQARPPVTKHLLMSFFLLGLLGIFGNQLLFLIGLNLTNPTYAAATQPAIPVLTFMFSAIMGTEKVNLLRYEGVAKVGGTIICVSGAISMVLYPGPVVIGNPETGMEHVSQNPSGLKDVGFDQFQLGVICIIGNCMCMAGYLSIQAKLLKKYPTNLSLTAYSYFFGTVLMVIVSIFMTDGITDWTLTQSEILAVLYAGIIASALGYGLITWSNKILGPTMVSLYNSLQPAFATLLSLIFLGSPVYLGRNAKKVLL* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0223 926 Pfam EamA-like transporter family 496 610 IPR000620 GO:0016020|GO:0016021
Amo05g0223 926 Pfam EamA-like transporter family 46 116 IPR000620 GO:0016020|GO:0016021
Amo05g0223 926 Pfam EamA-like transporter family 797 916 IPR000620 GO:0016020|GO:0016021
Amo05g0223 926 Pfam EamA-like transporter family 177 301 IPR000620 GO:0016020|GO:0016021
Amo05g0223 926 Pfam EamA-like transporter family 622 747 IPR000620 GO:0016020|GO:0016021
Amo05g0223 926 Pfam EamA-like transporter family 315 455 IPR000620 GO:0016020|GO:0016021
Amo05g0223 926 SUPERFAMILY Multidrug resistance efflux transporter EmrE 214 310 - -
Amo05g0223 926 PANTHER WAT1-RELATED PROTEIN 41 301 - -
Amo05g0223 926 SUPERFAMILY Multidrug resistance efflux transporter EmrE 835 917 - -
Amo05g0223 926 SUPERFAMILY Multidrug resistance efflux transporter EmrE 533 610 - -
Amo05g0223 926 PANTHER WAT1-RELATED PROTEIN 621 918 - -
Amo05g0223 926 SUPERFAMILY Multidrug resistance efflux transporter EmrE 655 753 - -
Amo05g0223 926 PANTHER WAT1-RELATED PROTEIN 315 613 IPR030184 GO:0016021|GO:0022857
Amo05g0223 926 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 132 - -
Amo05g0223 926 SUPERFAMILY Multidrug resistance efflux transporter EmrE 349 457 - -
Amo05g0223 926 PANTHER WAT1-RELATED PROTEIN 621 918 IPR030184 GO:0016021|GO:0022857
Amo05g0223 926 PANTHER WAT1-RELATED PROTEIN 41 301 IPR030184 GO:0016021|GO:0022857
Amo05g0223 926 PANTHER WAT1-RELATED PROTEIN 315 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0223 Amo-Chr5 2899594 2931442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0223 704 918 Nodulin-like Gene Family AT5G45370 56.388 4.35e-80 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0223 - - aip:107642467 423.705