Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0189 ATGGCTGAATCTCTACTTCGAATGGTGATTGAAAACTTGCAAGCTTTTGTTCAGGACGAGCTTGCAACTCTTTGGGGAGTCCACTCGCAGATTCAAGAGCTGTCAGGGAACCTTGCTGTAATCCATGCAGTGGTCCAAGATGCTGAAGAGAAGCAGATCAGAGAGCGTGCTGTGAAGCTTTGGCTGCAGAAGCTTTCAGATGCAGCACACGTGCTTGATGATATCTTAGATGAATGTTCAATAGAGTCCAACCGTCTACACAGTGACCAGTGCTTAACTCGTCTTGATCCTGTGACGATCATGTTTCGTCGGGACATTGGTAAGAGGATGAAAGAGATGGTTGACAGGTTTCGTCAAATTGATGAAGAAAGGAGAAGGTTTGAGTTGCGTGGAAGAGTTCCAGAGAGGCAACAAGAAGATGAAGCATGGCGCCAGACATGTTCTGGTATCACTGAGCACAATATCTATGGAAGGGAGCAAGACACAGAAAATATTGTGGAGTTTCTTTCAAGGAGTGCTGATAGCAGTAACGACCTCTCTGTTTATCCAATTGTTGGCATGGGGGGCCTTGGAAAAACAACACTTGTCCGATGGGTTTACAATGACAAGAAGGTAATTGAACATTTCGATCTGAGAATTTGGGTTTGTGTTTCCACTGAATTCAATACCATGAGAATTCTAGAGTCCATTGTGGAATCTACAAGTGGACATAACCCAAACCTCTCTACTTTAGAAGCACTGAAAAACAAAGTTCAAGAAATACTGCTAGGCAAAAGGTATTTACTTGTTCTAGACGATATGTGGAGCACGGACAAATGGGAGGACTTGAAGTCTGTTTTGCTTTGCGGTGGTGGAACAAAAGGTGCTGCAATTTTGGTCACTACCCGAGTTGAGAGTGTTGCATCTGTCATGGGAACATGCCCTGCTCATCACTTGTCACCATTATCCGAGGATGACAATTGGTTATTGTTCAAATACCATGCATTTGGATCAGACAAAGTGGAGCGCACAGAGCTTGTGGCAATAGGCAAGGAGATTGTAAAGAAATGTGGTGGTTCCCCTCTTGCATCTAAAGCACTTGGAAGCCTTTTGCGCAATAAAAAAGAGGAAATACAGTGGGTGAATGTATTGGAAAGTAAGTTTTGGGACATACTTGAGGATGATGCTATTATTGTACGTGCTTTGAAAATCAGCTACTTCCATTTGAAGTTGTCATTAAGACAATGCTTTGCTTTTTGTGCCATTTTCCCCCAAGATTTTGGAATGGAAAAGGAGCAACTTATTCATCTTTGGATGGCCAATGGTTTGATCAAATCCAAAGGGAAGTTGGAGATTGAGGATGTTGGTAATGAGGCTTGGGAGGAATTATGTCAGAGGTCATTTTTCCAAGAAGTTGAGATTGATGAATTGGGAAGAACTACATTCAAGATGCATGATTTATTTCATGAACTTGCCCAATCCATAATGGGAGAAGAGTGCAGAGTTTATGATGAGTCTGCAAGCTTGACCAATTTGTCTACAAGGGTCCACCATGTCACTTGTTTAAAACCAGAGAGGAAGGTAAACATGGATCCCTTCAAGAAAGCTGAATCCTTGAGGAGTATGATTAATCTTCTTCCATTTGATGATTATCACAATCTTAATGGGTTGCCACCATTCAATTCTCTCCGTGCACTACGTACAAATGCTTCTCAACTCTCAGCACTGAAGAGTTTAACGCATTTGAGGTACCTAAATCTGCGTAGGAGCGGTATCACAACACTGCCTGAATGTGTTTCGAGGTTACAAAAATTGCAGATTCTGAAGTTAGAAGACTGTCTAAATCTTTCTTGTTTGCCCAAACACTTAACACAATTGAAGGATCTTAGACATCTCCTAATTGAAGAGTGTCATTCATTAGTAGAGATGCCTCCGAATATCGGCGAGTTGAAATGTTTGAGAACATTGAATCTTTTTATTGTGGATAAAAAGGAAGGGCATGGGTTATCAGAGTTGCGTGATTTACAGCTTGGAGGCAAACTACGCATCAAGGGGCTTGAAAATGTCTTAAATGAGGGTGATGCTAGAGATGCTAATTTGAGTGCTAAGAAGAAGTTGGAAAACTTATACCTGTCATGGGACTCCTCTGATTCAAGGCGTGGTGCCAATGCTGAGAGAATACTTGAAGCCCTTGAGCCTCCCTCCAATCTCAAGAGTTTTGGGATGAATGGTTACAGCGGAGTAGAGTTGCCTAGCTGGATGCAAAATACTTCAATTCTTTCCAGCTTAGTTACGGTGATACTCTATGATTGCAAGAACTGCAAGCACCTTCCTCCGCTGGGTAAATTACCACATTTAACTGTTCTTTATGTATCTGGAATGAAAGATGTGAAGTACATCGATGAGGACTCATATGATGGCGTGGATGAGAAGGCATTCAAATCGTTGAAGTACCTGACATTATCGAAGCTGCCAAACTTGGAAGGGATGTTACGAGATGAAAGAGTAGAAATGCTTCCGCTTCTTTCTAAATTAGAGGTCTCGTGTGTCCCTAAGATTAAGTTGCCACTCCTTCCATCTCTAGAGTACATTTCGATTCAAGGAACATGGTCAGACTCTGATCATAGTGATAGTGAAGGTATGGCTTCCATCCTAGAGGCTATTGGGCAGAATATGCAGCATGTCAAGACCCTCTTCATTTCAGGCTTCCCTAAACTCAAGGCATTACCCCATGAATTAAGCAGCCTCAGCTCGCTACAAAAGTTAGAAATTTATGGTGGTGATGAACTTGAATCGTTTTCGGAGAATGTGATGCAAGGTCTGTGTTCTCTTCGGAGTTTGAAAATTGGTTCATGTAAGAAACTGAAATCCTTGTCTGAAGGTGTGGGACATCTGACTTGTTTGGAGAGTCTTGATATCGTGAATTGTCCAGAGCTGGTGTTACCAAGTAGCATGAATAAATTAGTTTCCCTTCAACGGGTTTACATCTATTCTTGTGGTACAATGCCAGAAGGCTTACAACATGTCCCTTCCCTCCAAAGTTTGGATGCGCGTAACTTACATTCAATTCCTGAGTGGTTGGGGGACTTAACTTCTCTTCAAAAGTTAGATCTCTACTGTAAGGGGTTAAGGTCACTGCCCAGTAGCTTCCGAAATCTGACAAACTTGCGTGAGCTATCTATTTATGGGTGCCATAAGGAGCTGCAGAAGCGATGCACCAGAGTAACAGGACAGGATTGGCAGGCCATTGCTCACATCCCACAATTCAAACTGGTTCCCATTCATGAAGAAACATTTTCTGATAAAATCAGATTCAAATGGAGATCATGGCAGCTAAGAAGAGATCGACGTCGTCATCATTTCGCTGAAGCTGATACATTTGACTATCTGGTTGATACGCTCTTTTATTGGTACTATATGTGA 3402 0.4212 MAESLLRMVIENLQAFVQDELATLWGVHSQIQELSGNLAVIHAVVQDAEEKQIRERAVKLWLQKLSDAAHVLDDILDECSIESNRLHSDQCLTRLDPVTIMFRRDIGKRMKEMVDRFRQIDEERRRFELRGRVPERQQEDEAWRQTCSGITEHNIYGREQDTENIVEFLSRSADSSNDLSVYPIVGMGGLGKTTLVRWVYNDKKVIEHFDLRIWVCVSTEFNTMRILESIVESTSGHNPNLSTLEALKNKVQEILLGKRYLLVLDDMWSTDKWEDLKSVLLCGGGTKGAAILVTTRVESVASVMGTCPAHHLSPLSEDDNWLLFKYHAFGSDKVERTELVAIGKEIVKKCGGSPLASKALGSLLRNKKEEIQWVNVLESKFWDILEDDAIIVRALKISYFHLKLSLRQCFAFCAIFPQDFGMEKEQLIHLWMANGLIKSKGKLEIEDVGNEAWEELCQRSFFQEVEIDELGRTTFKMHDLFHELAQSIMGEECRVYDESASLTNLSTRVHHVTCLKPERKVNMDPFKKAESLRSMINLLPFDDYHNLNGLPPFNSLRALRTNASQLSALKSLTHLRYLNLRRSGITTLPECVSRLQKLQILKLEDCLNLSCLPKHLTQLKDLRHLLIEECHSLVEMPPNIGELKCLRTLNLFIVDKKEGHGLSELRDLQLGGKLRIKGLENVLNEGDARDANLSAKKKLENLYLSWDSSDSRRGANAERILEALEPPSNLKSFGMNGYSGVELPSWMQNTSILSSLVTVILYDCKNCKHLPPLGKLPHLTVLYVSGMKDVKYIDEDSYDGVDEKAFKSLKYLTLSKLPNLEGMLRDERVEMLPLLSKLEVSCVPKIKLPLLPSLEYISIQGTWSDSDHSDSEGMASILEAIGQNMQHVKTLFISGFPKLKALPHELSSLSSLQKLEIYGGDELESFSENVMQGLCSLRSLKIGSCKKLKSLSEGVGHLTCLESLDIVNCPELVLPSSMNKLVSLQRVYIYSCGTMPEGLQHVPSLQSLDARNLHSIPEWLGDLTSLQKLDLYCKGLRSLPSSFRNLTNLRELSIYGCHKELQKRCTRVTGQDWQAIAHIPQFKLVPIHEETFSDKIRFKWRSWQLRRDRRRHHFAEADTFDYLVDTLFYWYYM* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0189 1133 Gene3D - 314 403 IPR042197 -
Amo05g0189 1133 SUPERFAMILY RNI-like 850 1058 - -
Amo05g0189 1133 SUPERFAMILY L domain-like 476 861 - -
Amo05g0189 1133 Pfam Rx N-terminal domain 6 88 IPR041118 -
Amo05g0189 1133 Gene3D - 405 487 IPR036388 -
Amo05g0189 1133 Gene3D Ribonuclease Inhibitor 506 657 IPR032675 -
Amo05g0189 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 413 IPR027417 -
Amo05g0189 1133 Gene3D Ribonuclease Inhibitor 973 1072 IPR032675 -
Amo05g0189 1133 Gene3D Ribonuclease Inhibitor 658 850 IPR032675 -
Amo05g0189 1133 Gene3D Ribonuclease Inhibitor 851 972 IPR032675 -
Amo05g0189 1133 Gene3D - 141 307 IPR027417 -
Amo05g0189 1133 PRINTS Disease resistance protein signature 350 364 - -
Amo05g0189 1133 PRINTS Disease resistance protein signature 254 268 - -
Amo05g0189 1133 PRINTS Disease resistance protein signature 181 196 - -
Amo05g0189 1133 PRINTS Disease resistance protein signature 593 609 - -
Amo05g0189 1133 SMART LRR_typ_2 1023 1045 IPR003591 -
Amo05g0189 1133 SMART LRR_typ_2 572 595 IPR003591 -
Amo05g0189 1133 Pfam NB-ARC domain 158 378 IPR002182 GO:0043531
Amo05g0189 1133 Gene3D - 6 125 - -
Amo05g0189 1133 CDD RX-CC_like 2 120 IPR038005 -
Amo05g0189 1133 PANTHER DISEASE RESISTANCE PROTEIN RP 5 950 IPR044974 GO:0006952
Amo05g0189 1133 PANTHER OS10G0130600 PROTEIN 5 950 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0189 Amo-Chr5 2188419 2192780 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0189 178 786 WRKY Transcription Factor Family AT5G45050 24.365 1.70e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0189 - - ahf:112747502 2024.98