Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0185 ATGGCAACTCATGCTTTGCTTGGAATTCTGATTGGAAACTTGTACACTTTTGTCCAGAATGAGATTGCAGCACTTTCTGGTGTTGACTCACAGACCCAAGACCTGTCTGAAAATCTCAGTGCAATCCGTGCGTTATTCCAAGATGCTGCAGAGGACCAATTTACAAGCCATGTCATGAAGGACTGGCTGAAGAAGCTTTCCGATGCTGCACATGTGTTGGAAGATATCTTGGAAGAATGTTCAATGGAATCCAACCGTCTCCAAAGTGAAGGGTGGTTAGCCCGCTTCCATCCCAAGACTATTTTGTTTCGTCATGCTATCAGCAAGAGGATGAAAGACATGGTCAAGAGGTTCCAGCTTATAGATGATGATAGGAGAAGGTTTCAGCTGCCTCTGGGAGTCAGACAAAGGCAACAAGAAGATGATGATCTGCGGCAAACTAGTTCTGCCATCACTGAGCACCAGATGTATGGAAGAGACCAAGATAGACACAAGATTGTAGACTTTCTCACACAGCATGCTAGTAGCATTGATGGCCTCTCTGTGTATCCCATTGTTGGTATGGGAGGTCTTGGCAAAACAACACTTGCTCGATGGGTCTTCAATGATGACAGGGTGAAACAACATTTTGATTTGAGAATTTGGGTTTGTGTTTCTACAAACTTCAATATGATGAAAATTCTACAGTCCATTATAGAATCCTGCACCGGAGTGAACCCAAACCTCTCCACTTTAGAAGCAATGCAAAGCAAAGTTCAACAAGTGTTTCTGGACAAACGGTGTTTGCTTGTTCTAGATGATGTGTGGGAGAATGACAAATGGGAGGACTTGAAGTCTGTGCTGAATTCTAGAGGAAGTGAAACCAAAGGTGTTTCAATTTTGGTCACAACACGTGATCAGATTGTTGCATCTGCCATGGAAACATGCCCTACTCAATCTCATCACTTACAGCCATTACCTAAGGATGAGAATTGGTCATTGTTCACACACTATGCATTTGGTCCAAACAAGGAGCAGCCTGCAAAGCTGGTGGAGATTGGCAAGGAAATCGTCAGAAGATGTGTGGGTAATCCCCTTGCATCCAAAGTTGTTGGAAGCCTTTTGCGTAATAAAAGAGAGGAAAAACAATGGCTCAATGTGTTGGAAAGTAAGTTTTGGGACATTGATGCTGTCATGGGTGCTTTGAGAATGAGTTATTTTCATTTGAAGCCATCAGCACGGCAATGCTTTTGTTTTTGTGCTCTCTATCCTGAAGATTTTCGAATCTCAAAGGAACAGCTAATTCATCTTTGGATGGCCAATGGACTTTTGGAGGTTGAAGATGAGGGTAACCGGCAATGGGAGGAGCTGCTCCAGAGATCATTTTTTCAAGAAGTATCGATTGACGCGAATGGAAACACCACCTTCAAGGTTCATGACTTATTCCTTGATCTTGCCCGCTGCATAGTGGGAGAAGAGTATAAAGCTTATGATGAGTCTGCAAGCTTAACCAATTTGTCAAGAAGGGTCCACCATGTAAGTTACTCTGGCTTGCCTGAGTTAAATCAGAATACCTTGAAGAATATTGAGTCCTTGAGGACTTTTATTGATCGTTATCCAGCAATTACCAGTGTCCTCGTCCAATATCAAGCATTGGTTTTGTCTGAAGTGCAGTTATGTAATTCTCTCCGAGCATTGCGTACAAGATCTTCTCAACTCTCAACACTGAAGAGTTTAACACATTTGAGGTACTTGAATATCTACAATAGTTACATTACGAAGTTGCCAAAATGTGTTTCTAGGCTGCAGAAATTGCAAATTCTAAAGCTAGAACAATGCCATTTTCTTACTTGTCTGTCCAAACACATATTAAAGTTGAAGGATCTCAGGCATCTCTTAATTGAAGGATGTCAGGCATTAGTAGAAATGCCTCCAAAAATGGGAGAGTTGAAACAACTAAAAACACTGAATATTTTTATTGTGGATTCAAAATCCAGACATGGCTTAGCAGAGCTACATGATTTACAGCTTGGTGGAAGACTACACATTAAAGGTCTCGAGAATGTCCTGAGCGAACATGATGCTAGAGAGGCTAATTTGATGAGTAAGAAGGAGCTGAGTTATTTATATTTGTCTTGGAATTCTCATTTTAATTTTAATTCATTATTTATTTGTCCGGAGAGAGTACTTGAAGCCCTTGAGCCTCCCCCTAATCTCAAGAATTTAGGGATTAATGGTTATAGGGGATCACAATTCCCTGGTTGGGTGAGAAATACTAACATCTTTTCAAGCTTAGTTAATGTTATACTCTTTGACTGCAACAACTGTGAGCAGATTCCTCCACTTGGTAAATTACCACATTTAGAAGGTCTTTATGTATGTGGTATGAAAGATGTGAAGTACATTGATGAAGACTCGTATGATGGAGTGGAGGAGAAGGTGGCCTTTAAGTCCCTAAAGGAACTAACTCTGTTAAAGTTGCCAAAGTTAGAGAGGATTGTAAGGGACGAAGGAGTAGAGATGCTCCCACTTGTTTCCAAAGTAACCATTTCATGCAGCCCCAATTTGAAGTTACCACTCCTTCAATCCGTGGAGGCACTTGAAATCTGA 2589 0.4121 MATHALLGILIGNLYTFVQNEIAALSGVDSQTQDLSENLSAIRALFQDAAEDQFTSHVMKDWLKKLSDAAHVLEDILEECSMESNRLQSEGWLARFHPKTILFRHAISKRMKDMVKRFQLIDDDRRRFQLPLGVRQRQQEDDDLRQTSSAITEHQMYGRDQDRHKIVDFLTQHASSIDGLSVYPIVGMGGLGKTTLARWVFNDDRVKQHFDLRIWVCVSTNFNMMKILQSIIESCTGVNPNLSTLEAMQSKVQQVFLDKRCLLVLDDVWENDKWEDLKSVLNSRGSETKGVSILVTTRDQIVASAMETCPTQSHHLQPLPKDENWSLFTHYAFGPNKEQPAKLVEIGKEIVRRCVGNPLASKVVGSLLRNKREEKQWLNVLESKFWDIDAVMGALRMSYFHLKPSARQCFCFCALYPEDFRISKEQLIHLWMANGLLEVEDEGNRQWEELLQRSFFQEVSIDANGNTTFKVHDLFLDLARCIVGEEYKAYDESASLTNLSRRVHHVSYSGLPELNQNTLKNIESLRTFIDRYPAITSVLVQYQALVLSEVQLCNSLRALRTRSSQLSTLKSLTHLRYLNIYNSYITKLPKCVSRLQKLQILKLEQCHFLTCLSKHILKLKDLRHLLIEGCQALVEMPPKMGELKQLKTLNIFIVDSKSRHGLAELHDLQLGGRLHIKGLENVLSEHDAREANLMSKKELSYLYLSWNSHFNFNSLFICPERVLEALEPPPNLKNLGINGYRGSQFPGWVRNTNIFSSLVNVILFDCNNCEQIPPLGKLPHLEGLYVCGMKDVKYIDEDSYDGVEEKVAFKSLKELTLLKLPKLERIVRDEGVEMLPLVSKVTISCSPNLKLPLLQSVEALEI* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0185 862 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 413 IPR027417 -
Amo05g0185 862 PANTHER OS05G0414200 PROTEIN 31 852 - -
Amo05g0185 862 SUPERFAMILY L domain-like 470 845 - -
Amo05g0185 862 PRINTS Disease resistance protein signature 255 269 - -
Amo05g0185 862 PRINTS Disease resistance protein signature 182 197 - -
Amo05g0185 862 PRINTS Disease resistance protein signature 354 368 - -
Amo05g0185 862 PRINTS Disease resistance protein signature 593 609 - -
Amo05g0185 862 CDD RX-CC_like 4 117 IPR038005 -
Amo05g0185 862 Pfam Rx N-terminal domain 7 92 IPR041118 -
Amo05g0185 862 Gene3D - 319 403 IPR042197 -
Amo05g0185 862 Pfam NB-ARC domain 164 382 IPR002182 GO:0043531
Amo05g0185 862 Gene3D - 405 478 IPR036388 -
Amo05g0185 862 Gene3D - 137 311 IPR027417 -
Amo05g0185 862 Gene3D - 7 120 - -
Amo05g0185 862 PANTHER DISEASE RESISTANCE PROTEIN RP 31 852 IPR044974 GO:0006952
Amo05g0185 862 Gene3D Ribonuclease Inhibitor 479 658 IPR032675 -
Amo05g0185 862 Gene3D Ribonuclease Inhibitor 659 861 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0185 Amo-Chr5 2117869 2120457 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0185 185 651 WRKY Transcription Factor Family AT5G45050 24.266 7.29e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0185 - - ahf:112800119 1085.09