Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0184 ATGTGCATAGCATTCAGTCCAATATCTGAGCTTTCATTCGTTCTAGCTTTTCAAATGGCTGAATCTCTACTTCAAATGGTTATTGAAAACTTGCAAGCTTTTGCTCAGGACGAGCTTGCAACTCTTTGGGGCGTCCACTCGCAGATTCAAGAGCTGTCAGGGAACCTTGCTGCAATCCACGCAGTGCTCCAAGATGCTGAAGAGAAGCAGATCAGAGAGCGTGCTGTGAAGCTTTGGCTGCAGAAGCTTTCAGATGCAGCTCACGTGCTTGATGATATCTTAGATGAATGTTCAATAGAGTCCAACCGTCTACACAGTGACCAGTGCTTAACTCGTCTTGATCCTGTGACGATTATTTTTCGTCGAGACATCGGTAAGAGGATGAAAGAGATGGTTGACAGGTTTCGTCAAATTGATGAAGAAAGGAGAAGGTTTGAATTGCGTGGAAGAGTTCCAGAGAGGCAACAAGAAGATGAAGCATGGCGCCAGACATGTTCTGGTATCACTGAGCACAAGATCTATGGAAGGGAGCAAGACACAGAAAATATTGTGGAGTTTCTTTCAAGGAGTGCTGATAGCAGTAACGACCTCTCTGTTTATCCAATTGTTGGCATGGGGGGACTTGGAAAAACAACACTTGTCCAATGGGTTTACAATGACAAGAAGGTAATTGAACATTTCCATCTGAGAATTTGGGTTTGTGTTTCCACTGAATTCAATACCATGAGAATTCTAGAGTCCATTGTGGAATCTACAAGTGGACATAACCCGAACCTCTCTACTTTAGAAGCACTGAAAAACAAAGTTCAAGAAATACTGCTAGGCAAAAGGTATTTACTTGTTCTAGACGATATGTGGAGCACGGACAAATGGGAGGACTTGAAGTCTGTTTTGCTTTGCGGAGGTGGAACAAAAGGTGCTGCAGTTTTGGTCACTACCCGAGTTGAGAGTGTTGCATCTGTCATGGGAACATGCCCTGCTCATCACTTGTCACCGTTATCCCAGGATGACAATTGGTTATTGTTCAAATACCATGCATTTGGATCAGACAAAGTGGAGCGCAGAGAGCTTGTGGCAATAGGCAAGGAGATTGTAAAGAAATGTGGTGGTTCCCCTCTTGCATCTAAAGCACTTGGAAGCCTTTTGCGCAATAAAAAAGAGGAAATACAGTGGGTGAATGTATTGGAAAGTAAGTTTTGGGACATACTTGAGGATGATGCTATTATTGTACGTGCTTTGAAAATCAGCTACTTCCATTTGAAGTTGTCATTAAGACAATGCTTTGCTTTTTGTGCCATTTTCCCCCAAGATTTTCGAATGGAAAAAGAGCAACTTATTCATCTTTGGATGGCCAATGGTTTGATCAAATCCAAAGGGAAGTTGGAGATTGAGGATGTTGGTAATGAGGCTTGGGAGGAATTATGTCAGAGATCATTTTTCCAAGAAGTTGAGATTGATGAATTGGGAAGAACTACATTCAAGATGCATGATTTATTTCATGAACTTGCCCAATCCATAATGGGAGAAGAGTGCAGAGTTTATGATGAGTCTGCAAGCTTGACCAATTTGTCTACAAGGGTCCACCATGTCACTTGTTTAAAACCAGAGATGGAGGTAAACATGGATCCCTTCAAGAAAGCTGAATCCTTGAGGAGTATGATTAATCTTCATCCATTTGATCATCGCAATCTTAATGGGTTGCCACCATTCAATTCTCTCCGTGCACTACGTACAAATGCTTCTCAACTCTCAGCACTGAAGAGTTTAACGCATTTGAGGTACCTAAATCTGCGTAGGAGCGGTATCACAACACTGCCTGAATGTGTTTCGAGGTTACAAAAATTGCAGATTCTGAAGTTAGAAGACTGTCTATATCTTTCTTGTTTGCCCAAACACTTAACACAATTGAAAGATCTTAGACATCTCCTAATTGAAGAATGTCATTCATTAGTAGAGATGCCTCCGAATATCGGGGAGTTGAAATGTTTGAGAACATTGAATCTTTTTATTGTGGATAAAAAGGAAGGGCGTGGGTTATCAGAGTTGCGTGATTTACAGCTTGGAGGCAAACTACGCATCAAGGGGCTTGAAAATGTCATAAATGAGGGTGATGCTAGAGATGCTAATTTGAGTGCTAAGAAGAAGTTGGAAAACTTATACCTGTCATGGGGCTCCTCTGATTCAAGGCGTGGTGCCAATGCTGAGAGAATACTTGAAGCCCTTGAGCCTCCCTCCAATCTCAAGAGTTTTGGGATGAATGGTTACAGCGGAGTAGAGTTGCCTAGCTGGATGCAAAATACTTCAATTCTTTCCAGCTTAGTTATGGTGATACTCTATGATTGCAATAACTGCAAGCACCTTCCTCCGCTGGGTAAATTACCACATTTAACTGTTCTTTATGTATCTGGAATGAAAGATGTGAAGTACATCGATGAGGACTCATATGATGGCGTGGATGAGAAGGCATTCAAATCGTTGAAGGACCTGACCTTATCGAAGCTGCCAAACTTGGAAGGGATGTTACGAGATGAAAGAGTAGAAATGCTTCCAGTTCTTTCTAAATTAAGGGTCTCGTGTGTCCCTAAGATTAAGTTGCCACTCCTTCCATCTCTAGAGCACATTTGGATTGAAGGAACAGGGTCAGACTCTGATCATGGTGATAGTGATAGTGAAGACATGGCTTTGTCTTTCCTGGAAGCTATTGTGGAGAATATGCGTCGTGTTAAGGTCCTCCATATTGAACACTTTCCTACACTCAAGGCATTACCCCATGAACTAGGCAGCCTCAATTCACTACAAGAGTTAGAACTCTACTTTTGCGATAGACTTGAGTCTTTTTCAGAGAACGTGGTGCAAGGTTTGGGTTCACTTCGAACTTTGACTATTAATCGTTGTAAGGAACTGAAATCTTTGTCTGAAGGTGTGAGACATCTAACTTGTCTGGAGCGCCTTGATATCATATACTGTCCAAAGCTGGTGACTCTACCGAGTAGCATGAATCAGCTAGTTTCCCTTCGTCATAGTTTCATCTGTTCTTGTGATACATTGCCAGAAGGCTTACAACATGTCCCTTCCCTCCAAAGTTTGGATGTGTGTGACATACGTTCAATTCCTGAGTGGTTGGGGGACTTAACTTCTCTTCAAAAGTTACGTCTCTCCAGTAAGGGGTTAAGGTCACTGCCCAGTAGCATCCGAAACCTGCCCAACTTGCGTGAGCTATCTATTGATGGGTGCCATAAGGAGCTGCAGAAGCGATGCACCAAAGTAACAGGACAGGATTGGCAGGCCATTGCTCACATCCCACAATTCAAACTGGTTCCCATTCATGAAGAAACATTTTCTGATAAAATCAGATCCAAATGGAGATCATGGCAGCTAAGAAGAGATCGACGTCGTCATCATTTCAATATGTTTGACTATCTGGTTGAAGGGATCTTTTATTACAATATGTGA 3453 0.4222 MCIAFSPISELSFVLAFQMAESLLQMVIENLQAFAQDELATLWGVHSQIQELSGNLAAIHAVLQDAEEKQIRERAVKLWLQKLSDAAHVLDDILDECSIESNRLHSDQCLTRLDPVTIIFRRDIGKRMKEMVDRFRQIDEERRRFELRGRVPERQQEDEAWRQTCSGITEHKIYGREQDTENIVEFLSRSADSSNDLSVYPIVGMGGLGKTTLVQWVYNDKKVIEHFHLRIWVCVSTEFNTMRILESIVESTSGHNPNLSTLEALKNKVQEILLGKRYLLVLDDMWSTDKWEDLKSVLLCGGGTKGAAVLVTTRVESVASVMGTCPAHHLSPLSQDDNWLLFKYHAFGSDKVERRELVAIGKEIVKKCGGSPLASKALGSLLRNKKEEIQWVNVLESKFWDILEDDAIIVRALKISYFHLKLSLRQCFAFCAIFPQDFRMEKEQLIHLWMANGLIKSKGKLEIEDVGNEAWEELCQRSFFQEVEIDELGRTTFKMHDLFHELAQSIMGEECRVYDESASLTNLSTRVHHVTCLKPEMEVNMDPFKKAESLRSMINLHPFDHRNLNGLPPFNSLRALRTNASQLSALKSLTHLRYLNLRRSGITTLPECVSRLQKLQILKLEDCLYLSCLPKHLTQLKDLRHLLIEECHSLVEMPPNIGELKCLRTLNLFIVDKKEGRGLSELRDLQLGGKLRIKGLENVINEGDARDANLSAKKKLENLYLSWGSSDSRRGANAERILEALEPPSNLKSFGMNGYSGVELPSWMQNTSILSSLVMVILYDCNNCKHLPPLGKLPHLTVLYVSGMKDVKYIDEDSYDGVDEKAFKSLKDLTLSKLPNLEGMLRDERVEMLPVLSKLRVSCVPKIKLPLLPSLEHIWIEGTGSDSDHGDSDSEDMALSFLEAIVENMRRVKVLHIEHFPTLKALPHELGSLNSLQELELYFCDRLESFSENVVQGLGSLRTLTINRCKELKSLSEGVRHLTCLERLDIIYCPKLVTLPSSMNQLVSLRHSFICSCDTLPEGLQHVPSLQSLDVCDIRSIPEWLGDLTSLQKLRLSSKGLRSLPSSIRNLPNLRELSIDGCHKELQKRCTKVTGQDWQAIAHIPQFKLVPIHEETFSDKIRSKWRSWQLRRDRRRHHFNMFDYLVEGIFYYNM* 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0184 1150 Gene3D - 160 325 IPR027417 -
Amo05g0184 1150 SUPERFAMILY L domain-like 494 877 - -
Amo05g0184 1150 Coils Coil 49 69 - -
Amo05g0184 1150 SMART LRR_typ_2 1044 1067 IPR003591 -
Amo05g0184 1150 SMART LRR_typ_2 589 612 IPR003591 -
Amo05g0184 1150 Gene3D - 332 421 IPR042197 -
Amo05g0184 1150 Gene3D - 24 143 - -
Amo05g0184 1150 Gene3D - 423 505 IPR036388 -
Amo05g0184 1150 Pfam Rx N-terminal domain 24 106 IPR041118 -
Amo05g0184 1150 PANTHER DISEASE RESISTANCE PROTEIN RP 23 968 IPR044974 GO:0006952
Amo05g0184 1150 Gene3D Ribonuclease Inhibitor 518 864 IPR032675 -
Amo05g0184 1150 CDD RX-CC_like 20 138 IPR038005 -
Amo05g0184 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 431 IPR027417 -
Amo05g0184 1150 PANTHER OS10G0130600 PROTEIN 23 968 - -
Amo05g0184 1150 Gene3D Ribonuclease Inhibitor 865 1009 IPR032675 -
Amo05g0184 1150 Pfam NB-ARC domain 176 396 IPR002182 GO:0043531
Amo05g0184 1150 Gene3D Ribonuclease Inhibitor 1010 1092 IPR032675 -
Amo05g0184 1150 PRINTS Disease resistance protein signature 199 214 - -
Amo05g0184 1150 PRINTS Disease resistance protein signature 952 968 - -
Amo05g0184 1150 PRINTS Disease resistance protein signature 368 382 - -
Amo05g0184 1150 PRINTS Disease resistance protein signature 272 286 - -
Amo05g0184 1150 SUPERFAMILY RNI-like 868 1125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0184 Amo-Chr5 2109264 2113349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0184 196 682 WRKY Transcription Factor Family AT5G45050 24.354 2.40e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0184 - - ahf:112747502 1946.78