Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0179 ATGCACGTGTTGGAAGATATCTTGGAAGATTGTTCAATGGAATCCAATCGACTTCAAAGTGAAGGGTGGTTAGCCCGCTTCCAACCCAAGACTATTTTGTTTCGTCATGCTATCAGCAAGAGGATGAAAGACATGGTCAAGAGGTTCCAGCGTATTGATGATGATAGGAGAAGGTTTCAGCTGCCTTTGGGAGTCAGACAGAGGCAACAAGAAGATGATGATCAGAGGCTAACTGGTTCTGCCATCCCTGAGCACCAGATGTATGGAAGAGACCAAGATAAACACAAGATTGTAGATTTTTTCACAGAGCATGCCAGTAGCATTGATGGCCTCTCTGTGTATCCCATTGTTGGCATGGCAGGACTTGGGAAAACAACACTTGCTCGATGGGTCTTCAATGACGAGAGGGTGATCCAGCATTTTGATTTGAGAATTTGGGTTTGTGTTACCACAAACTTCAATATGATGAGAATTCTACAGTCCATTGTAGAATCCTCCACCGGAGTGAACCCAAACCTCTCCACTTTAGAAGCAATGCAAAACAAAGTTCAACAAGTGTTGCTGGACAAACGGTGTTTGCTTGTTCTAGATGATGTGTGGGACAATATCAAATGGGAAGACTTAAAGTCCGTGTTGCATTATGGAGGAACCAAAAGTGTTTCAATTTTGGTCACGACACGTGATCAGATTGTTGCATCTGTCATGGAAACATGCCCTACTCATCACTTACAGCCATTACCTAAGGATGAGAATTGGTCATTGTTCACACACTATGCATTTGGTCCAAACAAGGAGCAGCCTGCAAAGCTGGTGGAGATTGGCAAGGAAATCGTCAGGAGATGTGTGGGTAATCCCCTTGCATCCAAAGTTGTTGGAAGCCTTTTGCGTAATAAAAGAGAGGAAAAACAATGGCTCAATGTGTTGGAAAGTAAGTTTTGGGACATTGATGCTGTCATGGGTGCTTTGAGAATAAGTTATTTTCATTTGAAGCCATCATCACGGCAATGCTTTTGTTTTTGTGCTCTCTATCCTGAAGATTTTCAAATCTCAAAGGAACAGCTAATTCATCTTTGGATGGCCAATGGACTAATTAAATCCAAAGGGCATTTGGAGGTTGAAGATGTTGGTAACCAGCAATGGGAGGAGCTGCTCCAGAGATCATTTTTTCAAGAAGTATCGACTGACAAGTTTGGAAACACCACCTTCAAGATCCATGACTTATTCCTTGATCTTGCCCACTCCATAGTGGGAGAAGAGTATAAAGCTTATGATGACTCTGCAAGCTTGACCAATTTGTCAAGAAGGGTCCACCATGTAAGTTACTTTGGCTTGCCCGAGTTAAATCAGCATACCTTGAAGAATATTGAGTCCTTGAGGACTTTTATTGATCTTGATCCAGCAATTAGCAATCTCCTCGATGGATTTCCAGCATTGGTTTTGCGTAAAGTGCAGTTATGTAATTCTCTCCGAGCATTGCGTACACGATCTTCTGAACTCTCAGCACTGAAAAGTTTAACACATTTGAGGTACTTGAATATTTACAATAGTTACATTACAAAGTTGCCAAAATGTGTTTCTAGGCTGCAAAAATTGCAAATTCTAAAGCTAGAACAATGCCATTTTCTTACTTGTCTGTCCAAACACATATTGAAGCTGAAGGATCTCAGGCATCTCTTAATTGAAGGATGTCGGTCATTAGTAGAAATGCCTCCGAAAATGGGGGAGTTGAAACAACTGAAAACACTGAATATTTTTATTGTGGATTCAAAAGCCAAACATGGCTTAGCAGAGTTACATGATTTACAGCTTGGTGATAGACTACACTTTAAAGGTCTCGAGAATGTCCAGAGCGAACGTGATGCTAGAGAGGCTAATTTGATGAGTAAGAGGGAGCTGAGTTATTTATATTTGTCTTGGAATTCTGATTCTAATTGCATTAGTCCGGAGAGAGTACTTGAAGCCCTTGAGCCTCCCCCTAATCTCAAGAATTTAGGGATTAATGGTTATAGGGGATCACAATTCCCTGGTTGGTTGAGAAATACTAACATCTTTTCAAGCTTAGTTAACGTTATACTATTTGATTGCAACAACTGTGAGCAGATTCCTCCACTTGGTAAATTACCACATTTAGAAGGTCTTTATGTATGTGGTATGAAAGATGTGAAGTGCATTGATGAAGACTCGTATGATGGAGTGGAGGAGAAGGTGGCCTTTAAGTCCCTAAAGGAGCTAACTTTGATAGAGTTGCCAAAGTTAGAGAGGATTGTAAGGGACGAAGGAGTAGAGATGCTCCCACTTGTTTCCAAAGTAACCATTCCATGCAGCCCCAATATGAAGTTGCCACTCCTTCAATCCGTGGAGGTACTTGCAATTGAAGGATTGAAATCTGACAATGAAGGCGTGGCTTCCTTTCCGGAAGAAATCTTTCTGAGTTTGCGTTATGTTAAACAGCTCAGGATTAGTAGCTTTCCCAAGCTGAAGGTTTTACGTCAAGAACTGGGCACCCTCAGCTCACTCCAGAAACTCGATATTTTTGGTTGTGATGAGCTTGAGTCCTTGGCAGAGAATGTTTTTCAAGGATTGAGTTCTCTTCGAAGATTGGGCATTTACCATTGTCCAAGACTAAAATCCTTGTCTAGTGCTGTGGAACACCTAACTTGTCTTGAGTCCCTTCGTATCATGTTTTGCCCAGAATTGAGGACTCTGCCAACTAACATGAATAAGCTAACTGCCCTCCATGATGCTTTTATCAATGGTAGAGTACCAGAAGGTCTTCAATGTATCCCATCCCTCAAAATTCTGATTCTAGATGAAGTGGATTCATTGCCAGAGTGGTTGGGAGATATGACTTCTCTGCAACGCTTAGTCATTCGTCTCTCTCCAAGGATAAAGTCACTTCCAAGTAGCTTTCGAAACCTGACAAACTTGCGTTCCCTCACAATTGAGAAATGTGCTGGGCTGGAGCAGCGATGCCAGAGAGAGACAGGGCAAGATTGGCCAAACATTGCTCACGTTCCACACGTTCAGTTGATTCCCACGCAGCAACTGAAACATACATGTTGGGAAATTGCCAAATTCAAATGGAGTTTGAGGAGGTTAAACATATCAAAACCTCCAAATTTTGCATTTGACGAAATGGTTGAAGATCTCCATAAGCAGAAGCAAGATTAG 3171 0.4172 MHVLEDILEDCSMESNRLQSEGWLARFQPKTILFRHAISKRMKDMVKRFQRIDDDRRRFQLPLGVRQRQQEDDDQRLTGSAIPEHQMYGRDQDKHKIVDFFTEHASSIDGLSVYPIVGMAGLGKTTLARWVFNDERVIQHFDLRIWVCVTTNFNMMRILQSIVESSTGVNPNLSTLEAMQNKVQQVLLDKRCLLVLDDVWDNIKWEDLKSVLHYGGTKSVSILVTTRDQIVASVMETCPTHHLQPLPKDENWSLFTHYAFGPNKEQPAKLVEIGKEIVRRCVGNPLASKVVGSLLRNKREEKQWLNVLESKFWDIDAVMGALRISYFHLKPSSRQCFCFCALYPEDFQISKEQLIHLWMANGLIKSKGHLEVEDVGNQQWEELLQRSFFQEVSTDKFGNTTFKIHDLFLDLAHSIVGEEYKAYDDSASLTNLSRRVHHVSYFGLPELNQHTLKNIESLRTFIDLDPAISNLLDGFPALVLRKVQLCNSLRALRTRSSELSALKSLTHLRYLNIYNSYITKLPKCVSRLQKLQILKLEQCHFLTCLSKHILKLKDLRHLLIEGCRSLVEMPPKMGELKQLKTLNIFIVDSKAKHGLAELHDLQLGDRLHFKGLENVQSERDAREANLMSKRELSYLYLSWNSDSNCISPERVLEALEPPPNLKNLGINGYRGSQFPGWLRNTNIFSSLVNVILFDCNNCEQIPPLGKLPHLEGLYVCGMKDVKCIDEDSYDGVEEKVAFKSLKELTLIELPKLERIVRDEGVEMLPLVSKVTIPCSPNMKLPLLQSVEVLAIEGLKSDNEGVASFPEEIFLSLRYVKQLRISSFPKLKVLRQELGTLSSLQKLDIFGCDELESLAENVFQGLSSLRRLGIYHCPRLKSLSSAVEHLTCLESLRIMFCPELRTLPTNMNKLTALHDAFINGRVPEGLQCIPSLKILILDEVDSLPEWLGDMTSLQRLVIRLSPRIKSLPSSFRNLTNLRSLTIEKCAGLEQRCQRETGQDWPNIAHVPHVQLIPTQQLKHTCWEIAKFKWSLRRLNISKPPNFAFDEMVEDLHKQKQD* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0179 1056 Gene3D - 332 414 IPR036388 -
Amo05g0179 1056 Gene3D Ribonuclease Inhibitor 448 766 IPR032675 -
Amo05g0179 1056 Gene3D - 246 330 IPR042197 -
Amo05g0179 1056 SUPERFAMILY RNI-like 778 1034 - -
Amo05g0179 1056 Pfam NB-ARC domain 95 309 IPR002182 GO:0043531
Amo05g0179 1056 PANTHER OS05G0414200 PROTEIN 5 855 - -
Amo05g0179 1056 SUPERFAMILY L domain-like 403 747 - -
Amo05g0179 1056 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 340 IPR027417 -
Amo05g0179 1056 Gene3D Ribonuclease Inhibitor 771 915 IPR032675 -
Amo05g0179 1056 Gene3D Ribonuclease Inhibitor 916 996 IPR032675 -
Amo05g0179 1056 PRINTS Disease resistance protein signature 834 850 - -
Amo05g0179 1056 PRINTS Disease resistance protein signature 186 200 - -
Amo05g0179 1056 PRINTS Disease resistance protein signature 113 128 - -
Amo05g0179 1056 PRINTS Disease resistance protein signature 281 295 - -
Amo05g0179 1056 Gene3D - 68 240 IPR027417 -
Amo05g0179 1056 PANTHER DISEASE RESISTANCE PROTEIN RP 5 855 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0179 Amo-Chr5 2073406 2076659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0179 116 584 WRKY Transcription Factor Family AT5G45050 22.605 3.85e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0179 - - ahf:112747502 1219.91