Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0178 ATGTGCATAGCATTCAGTCCAACATCTGAGCTTTCATTCGTTCTAGCTTTTCAAATGGCTGAATCTCTACTTCAAATGGTGATTGAAAACTTGAGCGCTTTTGTTCAGGACGAGCTTGCAACTCTTTGGGGCGTCCACTCGCAGATTCAAGAGCTGTCAGGGAACCTTGCTGCAATCCATGCAGTGCTCCAAGATGCTGAAGAGAAGCAGATCAGAGAGCGTGCTGTGAAGCTTTGGCTGCAGAAGCTTTCAGATGCAGCACACGTGCTTGATGATATCTTAGATGAATGTTCAATAGAGTCCAACCGTCTACACAGTGACCAGTGCTTAACTCGTCTTGATCCTGTGACGATCATGTTTCGTCGGGACATTGGTAAGAGGATGAAAGAGATGGTTGACAGGTTTCGTCAAATTGATGAAGAAAGGAGAAGGTTTGAGTTGCGTGGAAGAGTTCCAGAGAGGCAACAAGAAGATGAAGCATGGCGCCAGACATGTTCTGGTATCACTGAGCACAACATCTATGGAAGGGAGCAAGACACAGAAAATATTCTGGAGTTTCTTTCAAGGAGTGCTGATAGCAGTAACGACCTCTCTGTTTATCCAATTGTTGGCATGGGGGGACTTGGAAAAACAACACTTGTTCAACGGGTTTACAATGACAAGAAGGTAATTGAACATTTCGATCTGAGAATTTGGGTTTGTGTTTCCACTGAATTCAATACCATGAGAATTCTAGAGTCCATTGTGGAATCTACAAGGGGACATAACCCGAACCTCTCTACTTTAGAAGCAATGAAAAACAAAGTTCAAGAAGTACTGCTAGGCAAAAGGTATTTACTTGTTCTAGACGATGTATGGAGCACGGACAAATGGGAGGACTTGAAGTCTGTTTTGCTTTGCGGAGGTGGAACAAAAGGTGCTGCAATTTTGGTCACTACCCGAGTTGAGAGTGTTGCATCTGTCATGGGAACATGCCCTGCTCATCACTTGTCACCATTATCCGAGGATGACAATTGGTTATTGTTCAAATACCATGCATTTGGATCAGACAAAGTGGAGCGCACAGAGCTTGTGGCAATAGGCAAGGAGATTGTAAAGAAATGTGGTGGTTCCCCTCTTGCATCTAAAGCACTTGGAAGCCTTTTGCGCAATAAAAAAGAGGAAATACAGTGGGTGAATGTATTGGAAAGTAAGTTTTGGGACATACTTGAGGATGATGCTATTATTGTACGTGCTTTGAAAATCAGCTACTTCCATTTGAAGTTGTCATTAAGACAATGCTTTGCTTTTTGTGCCATTTTCCCCCAAGATTTTCGAATGGAAAAGGAACAACTTATTCATCTTTGGATGGCCAATGGTTTGATCAAATCCAAAGGGAAGTTGGAGATTGAGGATGCTGGTAATGAGGCTTGGGAGGAATTATGTCAGAGATCATTTTTCCAAGAAGTTGAGATTGATGAATTGGGAAGAACTACATTCAAGATGCATGATTTATTTCATGAACTTGCCCAATCCATAATGGGAGAAGAGTGCAGAGTTTATGATGAGTCTGCAAGCTTGACCAATTTGTCTACAAGGGTCCACCATGTCACTTGTTTAAAACCAGAGAGGGAGGTAAACATGGATCCCTTCAAGAAAGCTGAATCTTTGAGGAGTATGATTAATCTTTATCCATTAGATGATCATCGCAATCTTAATGGGTTGCCACCGTTCAATTCTCTCCGTGCACTACGTACAAATGCTTCTCAACTCTCAGAACTGAAGAGTTTAACGCATTTGAGGTACCTGAATCTGCGTAGCAGCGGTATCACAACACTGCCTGAATGTGTTTCGAGGTTACAAAAATTGCAGATTCTGAAGTTAGAAAGGTGTGAAAATCTTTCTTGTTTGCCCAAACACTTAACACAATTGAAGGATCTTAGACATCTCCTAATTGAATATTGTCATTCATTAGTAGAGATGCCTCCGAATATCGGGGAGTTGAAATGTTTGAGAACATTGAATCTTTTTATTGTGGATAAAAAGGAAGGGCGTGGGTTATCAGAGTTGCGTGATTTACAGCTTGGAGGCAAACTACGCATCAAGGGGCTTGAAAATGTCATAAATGAGGGTGATGCTAGAGATGCTAATTTGAGTGCTAAGAAGAAGTTGGAAAACTTATACCTGTCATGGGGCTCCTCTGATTCAAGGCGTGGTGCCAATGCTGAGAGAATACTTGAAGCCCTTGAGCCTCCCTCCAATCTCAAGAGTTTTGGGATGAATGGTTACAGCGGAGTAGAGTTGCCTAGCTGGATGCAAAATACTTCAATTCTTTCCAGCTTAGTTATGGTGATACTCTATGATTGCAAGAACTGCAAGCACCTTCCTCCGCTGGGTAAATTACCACATTTAACTGTTCTTTATGTATCTGGAATGAAAGATGTGAAGTACATCGATGAGGACTCATATGATGGCGTGGATGAGAAGGCATTCAAATCGTTGAAGGACCTGACCTTATCAAAGTTGCCAAACTTGGAAGGGATGTTAGGAGATGAAAGAGTAGAAATGCTTCCGCTTCTTTCTAAATTAAAGGTCTCATGTGTCCCTAAGATTAAGTTGCCACTCCTTCCATCTCTAGAGCACATTTGGATTAAAGGAACAGGGTCAGACTCTGATCATAGTGATAGTGAAGGTATGGCTTCCATCCTAGAGGCTATTGGGCAGAATATGCAGCATGTCAAGACCCTCTGCATTTCAGACTTCCCTAAACTCAAGGCATTACCCCATGAATTAAGCAGCCTCAGCTCGCTACAAAAGTTAGAAATTTATGGTGGTGATGAACTTGAATCGTTTTCGGAGAATGTGTTGCAAGGTCTGTGTTCTCTGCAAAGTTTGACAATTCATTCGTGTAAGAAGCTCAGATCCTTGTCTGAAGGTGTGGGACATCTAACTCGTCTGGAGAGCCTTGATATCATGATTTGTCCAAAGCTGGTGACTCTACCGAGTAACATGAATAAATTAGTTTCGCTTCGTGGAGTTCTCATCGCTTGTTGTGATACATTGCCAGAAGGCTTACAACATGTGCCTTCCCTCCAAAGTTTGGAAGTATATGAATCAAATTCAATTCCTGAGTGGTTGGGGGAAATAACTTCTCTTCAAAAGTTAGAACTCACCCGGGTGAGGTTAAGGTCACTGCCCAGTAGCTTCCGAAACCTGACAAGCTTGCGTGAGCTATCCATTGATGGGTGCCATAAGGAGCTGCAGAAGCGATGCACCAGAGTAACAGGACAGGATTGGCAAGCCATTGCTCACATCCCACAATTCAAACTGATTCCCATTCATGAAGAAACATTTTCTGATAAAATCAGATCCAAATGGAGATCATGGCAGCTAAGAAGAGATCGGCATCGAGGTCGTCATCATTTCGCTAAAGATGATAGATTTGACATTCTGGTTGAAAGGCTCTTTTATTGGTACAAAATGTGA 3465 0.4228 MCIAFSPTSELSFVLAFQMAESLLQMVIENLSAFVQDELATLWGVHSQIQELSGNLAAIHAVLQDAEEKQIRERAVKLWLQKLSDAAHVLDDILDECSIESNRLHSDQCLTRLDPVTIMFRRDIGKRMKEMVDRFRQIDEERRRFELRGRVPERQQEDEAWRQTCSGITEHNIYGREQDTENILEFLSRSADSSNDLSVYPIVGMGGLGKTTLVQRVYNDKKVIEHFDLRIWVCVSTEFNTMRILESIVESTRGHNPNLSTLEAMKNKVQEVLLGKRYLLVLDDVWSTDKWEDLKSVLLCGGGTKGAAILVTTRVESVASVMGTCPAHHLSPLSEDDNWLLFKYHAFGSDKVERTELVAIGKEIVKKCGGSPLASKALGSLLRNKKEEIQWVNVLESKFWDILEDDAIIVRALKISYFHLKLSLRQCFAFCAIFPQDFRMEKEQLIHLWMANGLIKSKGKLEIEDAGNEAWEELCQRSFFQEVEIDELGRTTFKMHDLFHELAQSIMGEECRVYDESASLTNLSTRVHHVTCLKPEREVNMDPFKKAESLRSMINLYPLDDHRNLNGLPPFNSLRALRTNASQLSELKSLTHLRYLNLRSSGITTLPECVSRLQKLQILKLERCENLSCLPKHLTQLKDLRHLLIEYCHSLVEMPPNIGELKCLRTLNLFIVDKKEGRGLSELRDLQLGGKLRIKGLENVINEGDARDANLSAKKKLENLYLSWGSSDSRRGANAERILEALEPPSNLKSFGMNGYSGVELPSWMQNTSILSSLVMVILYDCKNCKHLPPLGKLPHLTVLYVSGMKDVKYIDEDSYDGVDEKAFKSLKDLTLSKLPNLEGMLGDERVEMLPLLSKLKVSCVPKIKLPLLPSLEHIWIKGTGSDSDHSDSEGMASILEAIGQNMQHVKTLCISDFPKLKALPHELSSLSSLQKLEIYGGDELESFSENVLQGLCSLQSLTIHSCKKLRSLSEGVGHLTRLESLDIMICPKLVTLPSNMNKLVSLRGVLIACCDTLPEGLQHVPSLQSLEVYESNSIPEWLGEITSLQKLELTRVRLRSLPSSFRNLTSLRELSIDGCHKELQKRCTRVTGQDWQAIAHIPQFKLIPIHEETFSDKIRSKWRSWQLRRDRHRGRHHFAKDDRFDILVERLFYWYKM* 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0178 1154 PRINTS Disease resistance protein signature 199 214 - -
Amo05g0178 1154 PRINTS Disease resistance protein signature 272 286 - -
Amo05g0178 1154 PRINTS Disease resistance protein signature 611 627 - -
Amo05g0178 1154 PRINTS Disease resistance protein signature 368 382 - -
Amo05g0178 1154 Gene3D Ribonuclease Inhibitor 543 881 IPR032675 -
Amo05g0178 1154 Coils Coil 49 69 - -
Amo05g0178 1154 Pfam NB-ARC domain 176 396 IPR002182 GO:0043531
Amo05g0178 1154 Gene3D Ribonuclease Inhibitor 885 1124 IPR032675 -
Amo05g0178 1154 SUPERFAMILY RNI-like 827 1077 - -
Amo05g0178 1154 CDD RX-CC_like 20 138 IPR038005 -
Amo05g0178 1154 Gene3D - 423 505 IPR036388 -
Amo05g0178 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 431 IPR027417 -
Amo05g0178 1154 Pfam Rx N-terminal domain 24 106 IPR041118 -
Amo05g0178 1154 Gene3D - 332 421 IPR042197 -
Amo05g0178 1154 SUPERFAMILY L domain-like 494 878 - -
Amo05g0178 1154 Gene3D - 159 325 IPR027417 -
Amo05g0178 1154 Gene3D - 24 143 - -
Amo05g0178 1154 PANTHER DISEASE RESISTANCE PROTEIN RP 23 968 IPR044974 GO:0006952
Amo05g0178 1154 PANTHER OS10G0130600 PROTEIN 23 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0178 Amo-Chr5 2038850 2042485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0178 196 683 WRKY Transcription Factor Family AT5G45050 24.908 1.01e-08 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0178 - - ahf:112747502 1995.7