Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0177 ATGGCAACTGATGCTTTGCTTGGAATTCTCATTGGAAACTTGAACACTTTTGTTAAGAAAGAGATTGCAGCACTTTCCGGTGTTGACTCACAGATCCAAGAGCTGTCTAATAATCTCCAGGCAATCCGTGCATTGTTCCAAGATGCTGCAGAGGAGCAATTTACAAGCCATGCCATAAAGGACTGGCTGAAAAAGCTTTCCGATGCCATGCACGTGTTGGAAGATATCTTGGAAGATTGTTCAATGGAATCCAACCGTCTTCAAAGTGAAGGGTGGTTAGCCTGCTTCCATCCCAAGACTATTCTGTTTCGGCATGCTATCAGCAAGAGGATGAAAGACATGGTCAAGAGGTTCCAGCGTATTGATGATGATAGGAGAAGGTTTCAGCTGCCTTTGGGAGTCAGACAGAGGCAACAAGAAGATGATGATCAGAGGCTAACTGGTTCTGCCATCCCTGAGCACCAGATGTATGGAAGAGACCAAGATAAACACAAGATTGTAGATTTTTTCACAGAGCATGCCAGTAGCATTGATGGCCTCTCTGTGTATCCCATTGTTGGCATGGCAGGACTTGGAAAAACAACACTTGCTCGATGGGTCTTCAATGACGAGAGGGTGATCCAGCATTTTGATTTGAGAATTTGGGTTTGTGTTTCCACAAACTTCAATATGATGAGAATTCTACAGTCCATTGTAGAATCCTCCACCGGAGTGAACCCAAACCTCTCCACTTTAGAAGCAATGCAAAACAAAGTTCAACAAGTGTTGCTGGACAAACGGTGTTTGCTTGTTCTAGATGATGTGTGGGACAATATCAAATGGGAAGACTTAAAGTCCGTGTTGCATTATGGAGGAACCAAAAGTGTTTCAATTTTGGTCACGACACGCGATCAGATTGTTGCATCTGCCATGGAAACATGCCCTACTCAATCTCATCACTTACAGCCATTACCTAAGGATGAGAATTGGTCATTGTTCACACACTATGCATTTGGCCCAAACAAGGAGCAGCCTGCAAAGCTGGTGGAGATTGGCAAGGAAATCGTCAGAAGATGTGTGGGTAATCCCCTTGCATCCAAAGTTGTTGGAAGCCTTTTGCGTAATAAAAGAGAGGAAAAAGAATGGCTCAATGTGTTGGAAAGTAAGTTTTGGGACATTGATGCTGTCATGGGTGCTTTGAGACTAAGTTATTTTCATTTGAACCCATCAGCACGGCAATGCTTTTGTTTTTGTGCTCTCTATCCTGAAGATTTTCGAATCTCAAAGGAACAGCTAATTCATCTTTGGATGGCCAATGGACTTATTAAATCCAAAGGGCATTTGGAGGTTGAAGATGTTGGTAACCAGCAATGGGAGGAGCTGCTCCAAAGATCATTTTTTCAAGAAGTATCGATTGACAAGTATGGAAACACCACCTTCAAGATCCATGACTTATTCCTTGATCTTGCCCACTCCATAGTGGGAGAAGAGTATAAAGCTTATGATGAGTCTGCAAGCTTGACCAATTTGTCAACAAGGGTCCACCATGTAAGTTACTCTGGCTTGCCTGAGTTAAACCAGAATAACTTGAAGAATATTGAGTCCTTGAGGACCTTTATTGATCTTGATCCAGCAATTAGCAATCTCTTCCTTATGCCTCCAGCAATCGTTTTGCGTAAAGTGCAGTTATGTAATTCTCTCCGAGCATTGCGTACAAGATCTTCTGAACTCCCAGTACTGAAAAGTTTAACACATTTGAGGTACTTGAATATTTACAATAGTTACATTACAAAGTTGCCAAAATGTGTTTCTAGGCTGCAGAAATTGCAAATTCTAAAGCTAGAACATTGTCACTATCTCACTTGTCTGCCCAAACACTTGGCAAAGTTGAAGGATCTCAGTCATCTGATAATTGAAGGATGTTGGTCATTAATATCAATGCCTCCGAAAATAGGGGAGTTGAAACATCTAAAAACACTGAATATTTTTATTGTTGATTCAAAAGCCAAACATGGCTTAGCAGAGTTACATGATTTACAGCTTGGTGGAAGACTACACATTAAAGGTCTCGAGAATGTCCAGAGCGAACATGATGCTAGAGAGGCTAATTTGATGAATAAGAAGGAGCTGAGTTATTTATATTTGTCTTGGAATTCTGATTCTAATTCTAAATTATGCATTAGTCCGGAGAGAGTACTTGATGCCCTTGAGCCTCCCCCTAATCTCAAGAATTTAGGGATTAATGGTTATAGGGGATCACAATTCCCTGGTTGGGTGAGAAATACTAACATCTTTTCAAGCTTAGTTAATGTTATACTCTTTGAGTGCAACAACTGCGAGCAGATTCCTCCACTTGGTAAATTACCACATTTAGAAAGTCTTTATGTATATAGTATGAAAGATGTGAAGTACATTGATGAAGACTCGTATGATGGAGAGGAGGAGAAGGTGGCCTTTAAGTCCCTAAAGGAGCTAACTTTGATAGAGTTGCCAAAGTTAGAGAGGATTATAAGGGACGAAGGAGTAGAGATGCTCCCACTTGTTTCCAAATTAACCATTCCATGCAGCCAGAATATGAAGTTGCCACTCCTTCAATCTGTGGAGGTACTTGTAATTGAAGGATTGGAATCTAACAATGAAGACGTGGCTTCCTTTCTGGAAGAAATCTTTCTGAGTATGCGCTATGTTAAACAGCTCACGATTCGTAGGTTTCCCAAACTGAAGGTGTTACCTCAAGAACTGGGCACCCTAAGCTCACTCCAGGAACTGGATATTGATGATTGTGTTGAGCTTGAGTCCTTCGTAGAGAATGTTTTTCAAGGCTTGAGTTTTCTTCGAAAATTGACCATTTCCGATTGTCCAAGACTAAAATCCTTGTCTAGTGTTGCAGAACACCTAACTTGTCTTGAGATCCTTTCTATCATTGTTTGCCCAGAATTGATGACTCTGCCAACTAACATGAATAAGCTAACTTCCCTCCATGATGTTGGAATCTGCGCCGGGGAAGACAATGGTAGAGTACCAGAAGGTCTTCAATGTATCCCATCTCTCAAATCTCTGATGCTAGTTGAAGTAGATTCATTGCCAGAGTGGTTGGGAGATATGACTTCTCTGCAACGCTTATTCATTGGTCGCTCTCCAAGGATAAGGTCAGTTCCAAGTAGCTTTCGAAACCTGACAAACTTGCGTTCCCTCACAATTGAGAAATGTGATGGGCTGGAGCAGCGATGCCAGAGAGAGACAGGGGAAGATTGGCCAAACATTGCTCACGTTCCACACGTTGAGTTGATTCCCACGCAGCAACAGAAACATACATGTTGGGAACTGGCCAAATTCAGTTGGAATACGAGGAAGGCAAACATATCAGGATTTCCAGAATTTAATATATTTAACTCAATGGTTGAAGGTCTCCATGAGCAGAACCAAGATTAG 3411 0.416 MATDALLGILIGNLNTFVKKEIAALSGVDSQIQELSNNLQAIRALFQDAAEEQFTSHAIKDWLKKLSDAMHVLEDILEDCSMESNRLQSEGWLACFHPKTILFRHAISKRMKDMVKRFQRIDDDRRRFQLPLGVRQRQQEDDDQRLTGSAIPEHQMYGRDQDKHKIVDFFTEHASSIDGLSVYPIVGMAGLGKTTLARWVFNDERVIQHFDLRIWVCVSTNFNMMRILQSIVESSTGVNPNLSTLEAMQNKVQQVLLDKRCLLVLDDVWDNIKWEDLKSVLHYGGTKSVSILVTTRDQIVASAMETCPTQSHHLQPLPKDENWSLFTHYAFGPNKEQPAKLVEIGKEIVRRCVGNPLASKVVGSLLRNKREEKEWLNVLESKFWDIDAVMGALRLSYFHLNPSARQCFCFCALYPEDFRISKEQLIHLWMANGLIKSKGHLEVEDVGNQQWEELLQRSFFQEVSIDKYGNTTFKIHDLFLDLAHSIVGEEYKAYDESASLTNLSTRVHHVSYSGLPELNQNNLKNIESLRTFIDLDPAISNLFLMPPAIVLRKVQLCNSLRALRTRSSELPVLKSLTHLRYLNIYNSYITKLPKCVSRLQKLQILKLEHCHYLTCLPKHLAKLKDLSHLIIEGCWSLISMPPKIGELKHLKTLNIFIVDSKAKHGLAELHDLQLGGRLHIKGLENVQSEHDAREANLMNKKELSYLYLSWNSDSNSKLCISPERVLDALEPPPNLKNLGINGYRGSQFPGWVRNTNIFSSLVNVILFECNNCEQIPPLGKLPHLESLYVYSMKDVKYIDEDSYDGEEEKVAFKSLKELTLIELPKLERIIRDEGVEMLPLVSKLTIPCSQNMKLPLLQSVEVLVIEGLESNNEDVASFLEEIFLSMRYVKQLTIRRFPKLKVLPQELGTLSSLQELDIDDCVELESFVENVFQGLSFLRKLTISDCPRLKSLSSVAEHLTCLEILSIIVCPELMTLPTNMNKLTSLHDVGICAGEDNGRVPEGLQCIPSLKSLMLVEVDSLPEWLGDMTSLQRLFIGRSPRIRSVPSSFRNLTNLRSLTIEKCDGLEQRCQRETGEDWPNIAHVPHVELIPTQQQKHTCWELAKFSWNTRKANISGFPEFNIFNSMVEGLHEQNQD* 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0177 1136 PRINTS Disease resistance protein signature 182 197 - -
Amo05g0177 1136 PRINTS Disease resistance protein signature 597 613 - -
Amo05g0177 1136 PRINTS Disease resistance protein signature 352 366 - -
Amo05g0177 1136 PRINTS Disease resistance protein signature 255 269 - -
Amo05g0177 1136 SUPERFAMILY RNI-like 840 1068 - -
Amo05g0177 1136 Gene3D - 7 125 - -
Amo05g0177 1136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 411 IPR027417 -
Amo05g0177 1136 Coils Coil 32 52 - -
Amo05g0177 1136 Pfam NB-ARC domain 164 380 IPR002182 GO:0043531
Amo05g0177 1136 Gene3D Ribonuclease Inhibitor 494 846 IPR032675 -
Amo05g0177 1136 Pfam Rx N-terminal domain 7 91 IPR041118 -
Amo05g0177 1136 CDD RX-CC_like 4 117 IPR038005 -
Amo05g0177 1136 Gene3D Ribonuclease Inhibitor 990 1075 IPR032675 -
Amo05g0177 1136 Gene3D Ribonuclease Inhibitor 847 989 IPR032675 -
Amo05g0177 1136 PANTHER OS05G0414200 PROTEIN 29 952 - -
Amo05g0177 1136 PANTHER DISEASE RESISTANCE PROTEIN RP 29 952 IPR044974 GO:0006952
Amo05g0177 1136 Gene3D - 403 485 IPR036388 -
Amo05g0177 1136 SUPERFAMILY L domain-like 474 823 - -
Amo05g0177 1136 Gene3D - 317 401 IPR042197 -
Amo05g0177 1136 Gene3D - 137 309 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0177 Amo-Chr5 2015127 2018747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0177 185 655 WRKY Transcription Factor Family AT5G45050 23.938 2.11e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0177 - - ahf:112747502 1247.26