Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0174 ATGGAGAGGTACAAGTTAATTAAGGAAGTTGGTGATGGAACGTTTGGGAGTGTTTGGAGAGCTATTAATAAGCAAACTGGAGAAGTTGTTGCAATTAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCACTAAGAAAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCGGGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTTATGAAAGACAGGGAGAAGATGTTTTCTGAGGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTATATGCACCAGCGTGGATACTTCCACCGTGATCTGAAGCCTGAGAACTTGCTGGTTACCAAGGATATCATAAAAATTGCTGATTTTGGCCTAGCACGTGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGGTGGTATCGAGCTCCTGAAGTGCTACTTCAATCTTATCTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTGTTCTCTCTTCGTCCTCTTTTCCCTGGTGCCAGTGAAGCGGATGAGATCTACAAAATATGCGGTGTGATAGGCAGCCCAACCATTGAATCATGGGCTGATGGGCTGAAACTTGCAAGGGATATAAACTATCAGTTCCCACAGCTTGCTGGTGTACATCTTTCGGCACTGATACCATCTGCGAGTGATGATGCGGTCAGCCTTATCAGGTCACTTTGCTCATGGGATCCCTGCAAGAGGCCAACAGCTGCAGAGGCCCTTCAACATCCCTTTTTCCAGACTTGTTTTTATGTTCCTCCATCCCTTCGTACTAGAGCAGTGTCAAGAACTCCTCCATCTGCTGGAACAAGGGGAGCCCTTGATCAGCAAGGGGTTAGGAGATATTCTGGCATGTTGCCTAATTCAAAGCTCACCAATAACTTCTCCTCTCCGAAATTACATCCTCCTTTAGCTTCAGGTGTGCAACGTAAGCTGGATATGGTGAATCAGAATGGAAGTAAGAATGAGAAGTCCATGAATACTGTTAAACAATCAAAATATCGACAGCCTGGAAAGGATAGCCCAACTGCTATGAACAAGGGGAGGAATGCGAAGGCAATTTCTGAAACAGCGGATAGGTTGACCAATATGAATGTTGGTAGTGGTACTCGAAGAGGACAACCCCGCCCTCCTCCAATGAAGGCTGGAGTTAATTGGATTTCTGAATCTGGAAACTTCATGCTGAGAGCTGCACAGCCGATCCCCACCGGAAGAACTTTCAGTCGGAAGGTTGCTGGATGA 1353 0.4464 MERYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKMFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICGVIGSPTIESWADGLKLARDINYQFPQLAGVHLSALIPSASDDAVSLIRSLCSWDPCKRPTAAEALQHPFFQTCFYVPPSLRTRAVSRTPPSAGTRGALDQQGVRRYSGMLPNSKLTNNFSSPKLHPPLASGVQRKLDMVNQNGSKNEKSMNTVKQSKYRQPGKDSPTAMNKGRNAKAISETADRLTNMNVGSGTRRGQPRPPPMKAGVNWISESGNFMLRAAQPIPTGRTFSRKVAG* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0174 450 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 403 - -
Amo05g0174 450 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0174 450 CDD STKc_MAK_like 4 283 - -
Amo05g0174 450 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Amo05g0174 450 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0174 450 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Amo05g0174 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Amo05g0174 450 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0174 450 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 403 - -
Amo05g0174 450 MobiDBLite consensus disorder prediction 354 376 - -
Amo05g0174 450 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Amo05g0174 450 MobiDBLite consensus disorder prediction 354 386 - -
Amo05g0174 450 Gene3D Transferase(Phosphotransferase) domain 1 83 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0174 Amo-Chr5 1988462 1995544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0174 1 284 Core Cell Cycle Gene Families AT3G48750 38.699 3.24e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Amo05g0174 Pkinase 4.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0174 K08829 - gmx:100810150 818.15