Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0156 ATGACCGAGTCGACTGCGGTAGGAACACGTGGCTTCAATACTGAAAAGTTGCACAACTATTTGTCAATAGGATTGTTAGCTCCAAACATGGAGGCAAGAGTTGTAGACTGGAGTAGCGGTGAATTCTTGCCTCCGGGAAGCAGTGGTGAGCTTTGGTTGAGAGGACCTGCAATCATGAAAGGGTACTTGAATAATGAGGAAGCGACGATGTCAACAATCGATAAAGATGGTTGGCTGCATACTGGCGATGTTGTTTATTTTGATCAGGATGGGTATTTGTATATTTCAGACCGCTTGAAAGATATCATCAAATACAAGGGCTTTCAGATTGCCCCTGCTGATTTAGAAGCTGTGTTAATCTCACATCCGGAAGTTGTTGATGTCGCAGTTACAGCTGCCATGGACGAAGCAGCCGGGGAGATCCCAGTAGCATTTGTGGTCAGGAAGGTTGGAAGCATGATTTCTGCAAAGCAAATAATAGATTATGTTGCTGAGCAGGTTGCTCCATACAAGAAGGTTAGGAAAGTGATCTTCATTAAAAGGATACCAAGATCTCCAACTGGGAAGATCCTTCGGAGGCAGCTTAGGAATTTCTCCACTTCTAAACTCTAA 612 0.4412 MTESTAVGTRGFNTEKLHNYLSIGLLAPNMEARVVDWSSGEFLPPGSSGELWLRGPAIMKGYLNNEEATMSTIDKDGWLHTGDVVYFDQDGYLYISDRLKDIIKYKGFQIAPADLEAVLISHPEVVDVAVTAAMDEAAGEIPVAFVVRKVGSMISAKQIIDYVAEQVAPYKKVRKVIFIKRIPRSPTGKILRRQLRNFSTSKL* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0156 203 Gene3D - 1 100 IPR042099 -
Amo05g0156 203 Gene3D - 101 201 IPR045851 -
Amo05g0156 203 Pfam AMP-binding enzyme C-terminal domain 115 189 IPR025110 -
Amo05g0156 203 SUPERFAMILY Acetyl-CoA synthetase-like 1 198 - -
Amo05g0156 203 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 1 202 - -
Amo05g0156 203 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 202 - -
Amo05g0156 203 Pfam AMP-binding enzyme 1 105 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0156 Amo-Chr5 1837862 1840479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0156 1 203 Monolignol Biosynthesis Gene Families AT4G19010 66.995 1.55e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0156 K01904 - gmx:100804808 339.347