Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0153 ATGGCAACTTGCACTCTCTACTCCACACAATGTTTCAACACAATCTCATCAACCCCATCATCAAAAACACATTTAGGATTCCACCAAAGACAAGTAGTGTTCTACACAACAACCAATAACAAAAGAAGCAGCAACAAGAGAAGCGGAAACAACAATACCGGCCGCTATGTAATAACATGCGCGGCCGGGGACACGGTGGTGATTGGTCTTGCCGCAGACTCAGGCTGCGGCAAGAGTACCTTCATGAGAAGGCTAACAAGTGTGTTCGGGGGCGCGGCCGAGCCGCCCAAGGGCGGAAACCCGGACTCGAACACACTTATTAGTGACACAACCACCGTGATATGCTTGGATGATTACCATTCATTGGATAGAACCGGAAGAAAAGAGAAGGGTGTGACTGCACTTGATCCAAGAGCCAATGATTTTGACCTCATGTATGAACAAGTTAAGGCTCTTAAGGAAGGAATTGCAGTTGAGAAACCTATTTACAACCATGTCACTGGTCTCTTGGATCCACCAGAAGTCATCAAACCTCCCAAAATCTTGGTCATTGAAGGTTTGCATCCAATGTTTGATGCTCGGGTCAGAGATCTCTTGGACTTCAGCATCTACTTAGACATTAGTAATGAGGTTAAATTCGCATGGAAAATTCAGAGAGACATGGCAGAGCGTGGACACAGTCTTGAAAGCATCAAGGCTAGCATTGAAGCAAGGAAGCCTGATTTTGATGCTTATATTGATCCTCAAAAGCAATATGCAGATGCAGTGATAGAAGTGTTGCCAACTCAGCTGATCCCAGATGACAATGAAGGGAAGATTCTAAGAGTGAGGCTGATACAGAAAGAAGGGATTAAACACTTTAGCCCTGTTTATTTGTTTGATGATGGTTCCACCATTTCTTGGATTCCATGTGGAAGGAAGCTTACATGCTCTTACCCTGGCATCAAATTCTTCTATGGACCTGATACTTACTTTGGAAATGAGGTGTCAGTTGTAGAAATGGATGGTCAATTTGACAGATTAGATGAACTAATATATGTAGAGAGCCATCTAAGCAACCTGTCAACAAAGTTCTATGGAGAAGTGACTCAACAGATGTTGAAGCATGCTGACTTCCCTGGAAGCAACAATGGTACTGGTCTCTTCCAAACCATTGTTGGTCTCAAGATTAGAGACTTATATGAACAGATCATAACCTCCAAGGCTGAGACTCCTGTTGGAGCAGCTAAGGCTTAG 1236 0.4385 MATCTLYSTQCFNTISSTPSSKTHLGFHQRQVVFYTTTNNKRSSNKRSGNNNTGRYVITCAAGDTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKALKEGIAVEKPIYNHVTGLLDPPEVIKPPKILVIEGLHPMFDARVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGIKHFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFFYGPDTYFGNEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAETPVGAAKA* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0153 411 Pfam Phosphoribulokinase / Uridine kinase family 67 265 IPR006083 GO:0005524|GO:0016301
Amo05g0153 411 CDD PRK 67 356 - -
Amo05g0153 411 Gene3D - 63 296 IPR027417 -
Amo05g0153 411 PANTHER URIDINE KINASE 11 411 - -
Amo05g0153 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 336 IPR027417 -
Amo05g0153 411 PRINTS Phosphoribulokinase family signature 72 89 IPR006082 GO:0005524|GO:0005975|GO:0008974
Amo05g0153 411 PRINTS Phosphoribulokinase family signature 181 199 IPR006082 GO:0005524|GO:0005975|GO:0008974
Amo05g0153 411 PRINTS Phosphoribulokinase family signature 216 233 IPR006082 GO:0005524|GO:0005975|GO:0008974
Amo05g0153 411 PRINTS Phosphoribulokinase family signature 234 257 IPR006082 GO:0005524|GO:0005975|GO:0008974
Amo05g0153 411 ProSitePatterns Phosphoribulokinase signature. 216 229 IPR006082 GO:0005524|GO:0005975|GO:0008974
Amo05g0153 411 PANTHER PHOSPHORIBULOKINASE 11 411 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0153 119 293 PRT Gene Family AT3G27440 26.966 7.52e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0153 K00855 - gmx:100777515 723.005