Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0134 AGAGCCACTCTCGAGCCTCCCCTCCAGCCCTCCACTCTCACCTCTCGCTTTCACCATGTCCAGTCTCCACCGCGAGTTTCCAGCGCAACCTCTGTCCAGCCACCGCCTCCATCGCAAGGTCCTTGGAAGTCACTCACCGTCGTAAGTTCCTTTAAGCCAGCTTTCCGTTCGCGCAGCCAGCTTTCCTTTCAGCCGTCGAAATCGCAGCCACCGCCAGCGCCAGTTGCCGTCGCGCAGTCTTCTCGCCGGCGCCAGCTCTGTTCGACCCTTCCACCCCAGCCATTGTCCTTGTCGCCGCCAGCTCTGCACTCTTTCCTGTCTTCCACTAACCCTAGGGTTGCTTGCAATTATCCACACGAGAACATAACATTCAAGATAGATGAGAGTAGTAGCAACCCTAATTACTTGGCATTTGTGATTTGGTATCAACAGGGAATTAGAGACATAATTACTGTCCAGCTTTGTGAGACTGAGAATTTTAAGTGCAAGCTGCTAGATCGGAGCTATGGTGCAGTGTGGAGTAGCACCTGCGGCATTGATGGCATTGATTACTTGATTAGTTGA 564 0.5284 RATLEPPLQPSTLTSRFHHVQSPPRVSSATSVQPPPPSQGPWKSLTVVSSFKPAFRSRSQLSFQPSKSQPPPAPVAVAQSSRRRQLCSTLPPQPLSLSPPALHSFLSSTNPRVACNYPHENITFKIDESSSNPNYLAFVIWYQQGIRDIITVQLCETENFKCKLLDRSYGAVWSSTCGIDGIDYLIS* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0134 187 MobiDBLite consensus disorder prediction 59 83 - -
Amo05g0134 187 PANTHER EXPANSIN-LIKE B1 111 178 - -
Amo05g0134 187 Pfam Expansin C-terminal domain 122 176 IPR007117 -
Amo05g0134 187 PANTHER EXPANSIN-B3 111 178 - -
Amo05g0134 187 Gene3D - 114 180 IPR036749 -
Amo05g0134 187 MobiDBLite consensus disorder prediction 1 43 - -
Amo05g0134 187 SUPERFAMILY PHL pollen allergen 121 177 IPR036749 -
Amo05g0134 187 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0134 Amo-Chr5 1584264 1585770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0134 112 173 Expansin Gene Family AT4G38400 35.484 1.08e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0134 - - csin:114280961 115.161