Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0131 ATGGCGGCACCCACAAAACGAGACGAGCAAGAAGCTCTACGCCTCAAGTCCCTAGCGGACTCCAACTTCACTTCCTCCAGAAACCTCAACGCCGCCTTCAACTACGCCAAGCGCGCTCACCGCCTCGCCCCAAATCTTCCCGGCGTCACAGAGACCCTCGCCGCCCTCACCGTTCTCCGCGCCGCCGCCTCTAAGAACTCCCCTTTCCCTGACTGGTACGCCGTCCTCGGTGCTGAGCCCTTCGCCCCCGCCTCCGTCCTCCGCAAGCGCTACAAGCAGCTGGCGCTCCTACTCCACCCCGACAAGAGCCCCTACGTGGCATCTGATGAGGCATTCAAGCTCGTCGCCGAGGCCTTCCGATTGCTCTCCGACAGGGCATGGAAGAGGGACTACGATGTCAAGCTCAGGTTGAGGATTCTGGATGAGAAGGAGAAGGAGAAGGTTGGTGAAGAGGACATGGATACATTTTGGACTGCATGCTCCACTTGCAGGCTCTTGCACCAGTTTGAGAGGAAGTACCTGGGACATAATCTGGTATGCCCCTCTTGCAGGAAGAGTTTTAAGGCTGTGGAGGTGGGTAGTGACGATGATGGGTCTGAAGAAGAGGAGGAGGAGAAGGAGGAGGAGGAGGAAGAAGAGGCAGAGAGAGCTAGGAAGGGTAGCGTTGGGAAATTGAAATCAAAAGAGGTGGTGGATGATGATGAGAGATTGGGGGATTTTGTGTCAAGGAGAAAAGCCAAGAGTGTGAAAGGGAAAATGGGCGTTGAAAAAGATGGAGGCTTGAGGAGGAGCCAGGGTTTGAAGGGTGGAATTGAGGGTGGTAAAGTGAGAAATGAGGATTCTGAGAGCAAAGGAGAGGGTGTTGCGGGAAGCTTGAGAAGTGGGGATTTGAGAACGCGGACTAAAGGGAAAGTAGGTATTGAAAAAGGTGGAGGCTTGATGAAGAGCAGGTGTTTGACGGGTGGAGTTGAGAGTAACGAAGTGGGAAATAAGGTCTTGGAGAGTGAAAGAGAGGGTATTGGAGGAAGCTTGAGAAGTGGGGATTTGAGAAAGAGTAAGCGTGGGGAGGTGTTGGACAGTTCAAAACCCAAGAGGGTCAAAACTGGGGAGGAAATGATGACATTGGCTGAGTTTCAGTCTGAAGTAAAGCGAACAGCTCGGCAGAAGATGAAGTTGAAACTAAAAGAAAATGGAGAAGATCATGAAACAGAGAGGAGGAGCGAGCGGCGGGAAAGACTTGGTGAGTTGAAAAATAACAAGGATTTAGAGGCTGGGGAATGTAGGAGTATGAAGAAGAGTGTGAAGCCATTAGTCAAGGGGATGAAAGAGGACTCTCTGAAGAAAAAGGAAGCGGGACCTGAGAAGCACGGTGATTCTGGTGGAAGGGACTTGGAGACTTTCACAGTGGTGGATTCGGATTTTTATGATTTTGACAAAGATAGAACTCATAGAAGCTTTAGGAAAGGTCAAATGTGGGCTGTATATGATGATATTGATGGAATGCCAAGGCATTATGCCTTGATTGATGAAGTTTTTTCAGCAAACCCTTTTCAAGTGAGTATAAGTTGGTTTGATCTACAAAACAATGGGGTTGAAAAGATTATTAGTTGTGAGAAAATGGGGTTTCACATGCCATGTGGAAGATTTAAAGTTACCCAGAAGGCTTCCATAAATTCAGTAAATGTATTTTCTCATGTTGTGGACTGTGATCGAGCAGCACGCGAGGTCTACCAAGTTTATCCAAAGAAGGGCTCTGTATGGGCACTTTATGGTAAGGCAACTCTTGATGCAGATGAACAAAATTTTGCAGCCAATGGTAAGAGATGCTATGACATTGTTGTATTCTTAACAAGTTACAGTGAAATCTCTGGTCTGAGCATGGCATATCTTGAGAAGGTTGATGGTTACAAGACTGTATTTAAGAGACAAGAGAGGGGAAGTCATGCTATTAGATTTCTTGGAAAGGATGACCTGTGGTTAATTTCTCATCAGATTCCTGCTCGAAAATTATCTTGTAATGATACTCCTGAACTTTTGAAAGATTGTTGGGAACTTGATCCTGCTTCACTTCCCTCGGATTTACTTACTATAGGTGGCATAGATAATTGA 2109 0.4737 MAAPTKRDEQEALRLKSLADSNFTSSRNLNAAFNYAKRAHRLAPNLPGVTETLAALTVLRAAASKNSPFPDWYAVLGAEPFAPASVLRKRYKQLALLLHPDKSPYVASDEAFKLVAEAFRLLSDRAWKRDYDVKLRLRILDEKEKEKVGEEDMDTFWTACSTCRLLHQFERKYLGHNLVCPSCRKSFKAVEVGSDDDGSEEEEEEKEEEEEEEAERARKGSVGKLKSKEVVDDDERLGDFVSRRKAKSVKGKMGVEKDGGLRRSQGLKGGIEGGKVRNEDSESKGEGVAGSLRSGDLRTRTKGKVGIEKGGGLMKSRCLTGGVESNEVGNKVLESEREGIGGSLRSGDLRKSKRGEVLDSSKPKRVKTGEEMMTLAEFQSEVKRTARQKMKLKLKENGEDHETERRSERRERLGELKNNKDLEAGECRSMKKSVKPLVKGMKEDSLKKKEAGPEKHGDSGGRDLETFTVVDSDFYDFDKDRTHRSFRKGQMWAVYDDIDGMPRHYALIDEVFSANPFQVSISWFDLQNNGVEKIISCEKMGFHMPCGRFKVTQKASINSVNVFSHVVDCDRAAREVYQVYPKKGSVWALYGKATLDADEQNFAANGKRCYDIVVFLTSYSEISGLSMAYLEKVDGYKTVFKRQERGSHAIRFLGKDDLWLISHQIPARKLSCNDTPELLKDCWELDPASLPSDLLTIGGIDN* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0131 702 Coils Coil 375 395 - -
Amo05g0131 702 Coils Coil 199 220 - -
Amo05g0131 702 MobiDBLite consensus disorder prediction 441 462 - -
Amo05g0131 702 MobiDBLite consensus disorder prediction 191 225 - -
Amo05g0131 702 MobiDBLite consensus disorder prediction 248 263 - -
Amo05g0131 702 MobiDBLite consensus disorder prediction 341 371 - -
Amo05g0131 702 Pfam DnaJ domain 71 132 IPR001623 -
Amo05g0131 702 Gene3D DnaJ domain 58 161 IPR036869 -
Amo05g0131 702 CDD DnaJ 71 124 IPR001623 -
Amo05g0131 702 ProSiteProfiles dnaJ domain profile. 71 135 IPR001623 -
Amo05g0131 702 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 8 698 - -
Amo05g0131 702 MobiDBLite consensus disorder prediction 195 211 - -
Amo05g0131 702 SMART dnaj_3 70 127 IPR001623 -
Amo05g0131 702 MobiDBLite consensus disorder prediction 248 417 - -
Amo05g0131 702 PANTHER BNAC03G44070D PROTEIN 8 698 - -
Amo05g0131 702 Pfam Domain of unknown function (DUF3444) 466 671 IPR024593 -
Amo05g0131 702 PRINTS DnaJ domain signature 73 91 IPR001623 -
Amo05g0131 702 PRINTS DnaJ domain signature 91 106 IPR001623 -
Amo05g0131 702 PRINTS DnaJ domain signature 107 127 IPR001623 -
Amo05g0131 702 SUPERFAMILY Chaperone J-domain 63 135 IPR036869 -
Amo05g0131 702 MobiDBLite consensus disorder prediction 382 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0131 Amo-Chr5 1567041 1570047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0131 8 192 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.503 3.19e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0131 - - aip:107642362 1305.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0921 01 12339240 12342130 Amo05g0131 05 1567041 1570047 PCT