Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0091 ATGGCACCCTCATTCGACCACACCGCTCAAACCGTTTGTGTAATGGACGCTTCGGCCCATTTGGGCTTCGCCCTTGTCCACACACTCCTTCATAGGGGCTACACCGTTCATGCCTCCTTTCAAACACAAGGGGAAGATATGTTAAAGGGGATTTCTACTGACCCAAACAAGCTTAAGATATTCCGCTCAGACCCGTTTGATTATCAAAGCATAATGGATTCCCTTAAAGGCTGCTCTGCTTTGTTCTACTCTTTTCAACCTCCTTCTGATCAACCTGATTATGATGAATACATGGCTGACGTGGAGGTAAGGGCTGCACACAACGTGCTTGAAGCTTGTGCACAGACAGAAACCATTGAGAAAGTTGTTTTTACATCCTCGGCCACCGCTGTTGTTTGGAGAGAGGATCGTAAAACCATGGAACTAGACTTGGACGAGAGGCATTGGAGCGATGTCAATTTCTGTCGTAAATTCAAGTTGTGGCATGCAATGTCAAAGACGATGGCAGAGAAGACAGCGTGGGCCCTAGCAATGGACAGAGGGATGAATATGGTGTCAATCAACGCAGGTCTTTTGATGTCCCCTGATCTCTCCATCAGCAACCCTTACCTCAGAGGAGCCGCTGAGATGTACGAGGATGGTGTCTTCGTAACCGTTGATCTTCCTTTTCTCGTCGACGCACACATCTGTGTCTACGAGGATGTCTCATCCTACGGTCGTTATTTGTGCTTCAATCATATTATTAACACCCAAGACGATGCCCTTCGCCTCGCCCGCATCTTGACCCCTGATGCTGCTTCTTCCTTGCCTCAAAGAGAGGAGTGTGGGAAGAGTTTTATAGAGCAGAGAATAAGCAACAAGAAGCTGAACAAGTTGATGGTAGACTTTGAGGCTTGA 897 0.4749 MAPSFDHTAQTVCVMDASAHLGFALVHTLLHRGYTVHASFQTQGEDMLKGISTDPNKLKIFRSDPFDYQSIMDSLKGCSALFYSFQPPSDQPDYDEYMADVEVRAAHNVLEACAQTETIEKVVFTSSATAVVWREDRKTMELDLDERHWSDVNFCRKFKLWHAMSKTMAEKTAWALAMDRGMNMVSINAGLLMSPDLSISNPYLRGAAEMYEDGVFVTVDLPFLVDAHICVYEDVSSYGRYLCFNHIINTQDDALRLARILTPDAASSLPQREECGKSFIEQRISNKKLNKLMVDFEA* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0091 298 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 297 - -
Amo05g0091 298 CDD FR_SDR_e 12 294 - -
Amo05g0091 298 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 172 IPR002225 GO:0003854|GO:0006694|GO:0016616
Amo05g0091 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 258 IPR036291 -
Amo05g0091 298 Gene3D - 5 298 - -
Amo05g0091 298 PANTHER CINNAMOYL-COA REDUCTASE-LIKE SNL6 7 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0091 Amo-Chr5 1004941 1011512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0091 10 296 Monolignol Biosynthesis Gene Families AT5G58490 31.148 5.39e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0091 - - gmx:100793329 509.22