Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0084 ATGGGTGCTGGGGGTCCAGATGAAGAGGATAACAGGTGGCCGCCATGGTTGAAGCCACTGCTGAAGGAGAGCTTCTTTGTTCAATGCAAGCTACACGCTGATTCCCACAAGAGCGAATGCAACATGTATTGCTTGGACTGTATGAACGGCGCTCTCTGCTCTCTGTGTCTCGCTTACCACAAGGATCATCGTGCTATTCAGATAAGGCGGTCTTCATATCATGATGTGATAAGGGTGAATGAGATCCAGAAGGTGTTGGACATCACTGGTGTTCAGACCTACATTATCAACAGCGCAAGGGTTGTCTTCCTCAACGAGAGGCCTCAGCCAAGGCCTGGAAAAGGTGTCACTAACACCTGTGAAGTCTGTGAACGCAGCCTCCTTGATTCCTACCGCTTCTGTTCTCTCGGTTGCAAGATTGTTGGAACATCGAAGAACTTCCAGAAGAGGAAGAAACATTCAGCGGCAATGGCATCAGATTCAGAGGATTCATACAGCAGCAACAGCAGCCATGGCCGCCACCACAACAGTAATCAAGTCCAGAGTTTCACACCGTCCACACCGCCTCCAACTTCGGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCACACCGAGCCCCAATGGGAGGAGGACTAATCATAGAATACTAA 657 0.4932 MGAGGPDEEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSKNFQKRKKHSAAMASDSEDSYSSNSSHGRHHNSNQVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGGLIIEY* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0084 218 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 213 - -
Amo05g0084 218 MobiDBLite consensus disorder prediction 159 194 - -
Amo05g0084 218 MobiDBLite consensus disorder prediction 149 218 - -
Amo05g0084 218 Pfam PLATZ transcription factor 69 140 IPR006734 -
Amo05g0084 218 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0084 Amo-Chr5 940292 943217 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Amo05g0084 PLATZ 5.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0084 - - ahf:112747407 426.402