Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0069 ATGGTCCAACTATATGCGGCATTTTCCATGACCTTCAAATCTTCTTACTTTACCAAGCAATGTCATTATCTGAATAGAAAGTTTAGAAGCATACAAATTTATGATTCAAAGAAAAAGATGGGAGACGTGGCTAAGGACCTAACAGCAGGAACTATTGGAGGGGCAGCACAGTTGATATGTGGCCACCCCTTTGACACTATCAAGGTCAAGCTCCAAAGCCAGCCTACACCACTCCCTGGCCAGGTTCCCAAGTATGCTGGTGCAATTGATGCTGTGAAGCAGACAATAGCAGCCGAAGGACCAAGGGGTTTATACAAAGGTATGGGAGCCCCACTTGCTACTGTAGCTGCCTTCAACGCTGTCCTGTTTTCAGTAAGGGGACAACTGGAGGCATTATTGAGGTCCGAACCTGGTGCTCCTCTCACAGTAAACCAGCAGATTGTTTGTGGCGCCGGAGCCGGAGTTGCGGTTTCTGTTCTAGCTTGCCCCACTGAATTGGTCAAATGCAGATTGCAAGCACAAAGTGCTCTTGCTGGTTCTGGAGTTGCTACTCTGGCCGTGAAATATGGAGGACCTATGGATGTGGCCAGACAAGTTCTTCGGTCAGAAGGAGGTGTAAAAGGTCTTTTCAAGGGCTTGGTTCCTACAATGGCGCGTGAAATACCTGGAAATGCTGCAATGTTTGGAGTATATGAAGCAACTAAGCAATTACTCGCAGGAGGACGTGATACCTCTGGACTAGGTAGAGGTTCTCTGGTGGTTGCTGGAGGCTTGGCTGGAGCTTCCTTCTGGTTCATGGTATACCCAACCGACGTTGTTAAGAGTGTGATTCAAGTAGATGATTACAAAAATCCAAAGTTTTCTGGTACAATTGATGCTTTCAGAAAGATTCGCTCCACCGAAGGAGTCAAAGGACTGTATAAGGGTTTTGGTCCGGCGATGGCCCGAAGTGTTCCTGCAAATGCAGCTTGTTTCTTGGCATATGAGATGACACGATCAGCTCTAGGATGA 1011 0.4718 MVQLYAAFSMTFKSSYFTKQCHYLNRKFRSIQIYDSKKKMGDVAKDLTAGTIGGAAQLICGHPFDTIKVKLQSQPTPLPGQVPKYAGAIDAVKQTIAAEGPRGLYKGMGAPLATVAAFNAVLFSVRGQLEALLRSEPGAPLTVNQQIVCGAGAGVAVSVLACPTELVKCRLQAQSALAGSGVATLAVKYGGPMDVARQVLRSEGGVKGLFKGLVPTMAREIPGNAAMFGVYEATKQLLAGGRDTSGLGRGSLVVAGGLAGASFWFMVYPTDVVKSVIQVDDYKNPKFSGTIDAFRKIRSTEGVKGLYKGFGPAMARSVPANAACFLAYEMTRSALG* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0069 336 SUPERFAMILY Mitochondrial carrier 39 329 IPR023395 -
Amo05g0069 336 Gene3D Mitochondrial carrier domain 35 335 IPR023395 -
Amo05g0069 336 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 40 336 - -
Amo05g0069 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 247 334 IPR018108 -
Amo05g0069 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 141 237 IPR018108 -
Amo05g0069 336 Pfam Mitochondrial carrier protein 253 335 IPR018108 -
Amo05g0069 336 Pfam Mitochondrial carrier protein 43 133 IPR018108 -
Amo05g0069 336 Pfam Mitochondrial carrier protein 142 239 IPR018108 -
Amo05g0069 336 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 40 336 - -
Amo05g0069 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 41 132 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0069 Amo-Chr5 764347 767328 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0069 61 330 Antiporters AT1G79900 33.700 4.41e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0069 K15109 - gmx:100781634 500.36