Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0066 ATGGCATGTGTAGCGTCAGCAACCACCTCCTCCTCCTACTTTCCTTTCACCTATGATGCTTTTCTCAGCTTCAGAGGTGAGGATACCCGTTCTGGCTTCACTGGCTATCTCTATTACTCTCTCACAAATAGGGGAATCAAGACTTTCATTGATGATGAGGAGCTTGGGAGAGGGAAGGAGATCGCATCCTCACTTTTCACTGCAATCCAACAGTCCAGGGCCGCAATCGTTGTGCTCTCTAAGTATTATGCTTCTTCTTCATTTTGTTTGGATGAACTTGTCAAGATTCTTGACTGTGTTAAGGGAAAGGGCAGGTTGATTATTCCTGTTTTCTATGACGTGGATCCTTCTGATGTGCGGAAGCAGACAGGGACTTATGGAGAAGCATTGGCTGTGCATGAGAACAAGTTCAAGTTCGAGAGGCTTAAGAGATGGAAAATTGCTTTGGAGAAAATAGCAGACTTGTCTGGTTATCATTTCAAACACGGGGATGGATATGAGCACAAGTTTGTTGCCAAGATTGTTGGACATGTATCAATAGAGATTAAACGTGCTACTTTACCTATTGTAGATCACCCAGTTGGATTGGATTCCCAAGTGGAAAATGTAATTTCTCTTTTGAATGTTGGGTCTAGTGATGGAGTTTGCGTGCTCGGGATTCATGGAATTGGTGGAATAGGTAAAACAACACTTGCTGTGGCAGTGTATAATTGGCTTGTCAATCATTTTGCAGTTTTATGTTTTGAAAATATATGTTTCCATGAAAATACAAGAGAGAATTCAAATAAATATGGATTAAAACATCTGCAGAAGACCCTTCTGTTTGAACTAGTTGGAGAAAATAAAGTTACATTGATGAGTGTTAGAGAAGGAATATCAATGTTAAAGCAAAAACTCCAACGAAAGAAAATTATTTTGATTCTAGATGACATTGACCAACAAGAGCAATTAGATGCTCTAGCTGGAAATCTTGATTGGTTTAGTCCTGGTAGTAGAGTTATCATCACAACTCGGGACACGAGTTTGCTATCAAGGTATGAGGACAGAATAACATATGAGTTAGATAAGTTGAATGATAAAGATTCTCTAGAATTGATCAGTTTCAAAGCTTTAAAAACTAACAAAGTTGATCGAAGTTACTTAGACATCTTGAGCAGTGTGGTAACTTATGCTTCTGGCCTACCATTGACTTTGGAAGTTATGGGATCCAACTTTCTGGGCAAAAGTATAGAACAGTGGAAGTCTGCATTAGATCAATATAGAAAAATTCCCAATAAAAAGATACAAAATGTGCTTAAGGTAAGCTTTGATGGATTGGAGGAATTTGAGAAGGAAATTTTTCTTGATATTGCTTGTTGTTTCAAAGAATGTGAATTGACAGATGTCAAAAGGATACTTTGTGCTCATCATAATGTCGACTCCTTGGAATATGGACTTAAAGTGTTGGTTGAAAAATCACTAATAAAAATGGATGCATATCGTGGAATAATCTTGCATGCCCTCATTCAAGACATGGGTAGAGAAATTGTGCGTCAAGAATCACCAAAAAAGCCTGGGAAGCGTAGTCGATTATGGCTCCTTGAAGATATAGTTCAAGTTTTTGAAATGAATATGGGATCTGACAAAATTGAAATGATACATATGGATTTTCCCAAGTTTGAAAAAGTAATAAGATGGGATGGAGAGGCTTTCAAGAAAATGAGAAATCTCAAAACACTGTTTATTAGACATACTTATTTTTCCCAAGGTCCCAAGTATCTTCCAAATTGTTTAAGAGTGTTGAATTGGGAGGAATATCCTTCACCTTGTTTACCACTTGATTTTCATCCGGAGGGACTTGTCATATTCCAATTATCCGGCAAGAGTATACAGTCAGTTAGGTTTCTTGAAAAGCAAAAGGCTAGTCTAAAATTCTTTCATCCAAAACCTTTACATATGACAATAAAAATCTTTTAA 1956 0.3737 MACVASATTSSSYFPFTYDAFLSFRGEDTRSGFTGYLYYSLTNRGIKTFIDDEELGRGKEIASSLFTAIQQSRAAIVVLSKYYASSSFCLDELVKILDCVKGKGRLIIPVFYDVDPSDVRKQTGTYGEALAVHENKFKFERLKRWKIALEKIADLSGYHFKHGDGYEHKFVAKIVGHVSIEIKRATLPIVDHPVGLDSQVENVISLLNVGSSDGVCVLGIHGIGGIGKTTLAVAVYNWLVNHFAVLCFENICFHENTRENSNKYGLKHLQKTLLFELVGENKVTLMSVREGISMLKQKLQRKKIILILDDIDQQEQLDALAGNLDWFSPGSRVIITTRDTSLLSRYEDRITYELDKLNDKDSLELISFKALKTNKVDRSYLDILSSVVTYASGLPLTLEVMGSNFLGKSIEQWKSALDQYRKIPNKKIQNVLKVSFDGLEEFEKEIFLDIACCFKECELTDVKRILCAHHNVDSLEYGLKVLVEKSLIKMDAYRGIILHALIQDMGREIVRQESPKKPGKRSRLWLLEDIVQVFEMNMGSDKIEMIHMDFPKFEKVIRWDGEAFKKMRNLKTLFIRHTYFSQGPKYLPNCLRVLNWEEYPSPCLPLDFHPEGLVIFQLSGKSIQSVRFLEKQKASLKFFHPKPLHMTIKIF* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0066 651 SUPERFAMILY "Winged helix" DNA-binding domain 426 534 IPR036390 -
Amo05g0066 651 Gene3D - 16 179 IPR035897 -
Amo05g0066 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 450 IPR027417 -
Amo05g0066 651 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 20 619 - -
Amo05g0066 651 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 619 IPR044974 GO:0006952
Amo05g0066 651 Gene3D - 180 351 IPR027417 -
Amo05g0066 651 SMART till_3 17 155 IPR000157 GO:0007165
Amo05g0066 651 Pfam NB-ARC domain 198 426 IPR002182 GO:0043531
Amo05g0066 651 Gene3D - 356 440 IPR042197 -
Amo05g0066 651 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Amo05g0066 651 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
Amo05g0066 651 Pfam TIR domain 18 181 IPR000157 GO:0007165
Amo05g0066 651 PRINTS Disease resistance protein signature 298 312 - -
Amo05g0066 651 PRINTS Disease resistance protein signature 391 405 - -
Amo05g0066 651 PRINTS Disease resistance protein signature 217 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0066 Amo-Chr5 735017 737495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0066 18 618 WRKY Transcription Factor Family AT4G12020 29.173 2.70e-61 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0066 - - ahf:112747389 1221.45