Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0051 ATGATGCCTCCTCCGCCACCCGAAACGGTGATTGACATAAAGAACAGCAACAAGACCGCTCAACAAACAGTGGGTTTCAGCGGCGGTCTGGAGTTCTGGAACCTTACCTACACTGTGAGCAAGAAGTTGAAGGTGGAGGGGAAGTGGTCCAGTGAAGACGTGGACTTACTCCACGACATCACTGGCTATGCACCGAAGGGGTGCATCACGGCGGTGATGGGGCCCAGCGGTGCGGGGAAGTCGACGTTCTTGGACGGACTTGCTGGGAGGATCAAGAGTGGGAGCTTGAAAGGAAGGGTTTCATTGGATGGTGCAAGTGTGAGTGCAAGCTTGATCAAGAGAACTTCTGCATATATCATGCAGGACGATAGGCTTTTTCCTATGCTCACTGTTTATGAGACTTTGATGTTTGCTGCTGATTTTCGATTGGGGCCTCTCTCTCTTGCTGATAAAAGGCACCGAGTCGATAACTTGATAGATCAACTTGGCTTATCGACATCCAGGAACACGTACATAGGAGACGAAGGAACAAGAGGAGTTTCGGGCGGAGAGCGGCGGAGGGTGTCAATAGGAGTGGACATCATCCACGGTCCATCTCTTCTTTTCCTAGACGAGCCAACCTCGGGGCTGGACTCCACAAGCGCACACAGTGTGATCGAAAAGGTTCACGACATCGCACGCAGCGGCAGCACCGTCATTCTCACCATCCACCAACCCTCTTCAAGAATCCAAATGCTCCTCGACCATCTCATCATCCTCGCCAGGGGCCAGCTCATGTTTCAAGGCTCACCTAATGACGTCACACAACATTTGACTCGCATGTCCCGCAGGGTCCCAAAGGGTGAGAACCCTATCGAACATCTCATTGACGTCATCCAAGAATACGATCAATGTGAGGTTGGAGTGGAGGCGCTTGCTGAGTTTGCACGTACCGGAATGAAGCCCCCTCCGTTGAAGGAGGGTGTGTCTGTGGAGCCGTCGCCATCGCCCGTGAGGGCATGGCATGGGCGTGGGTATGAGGAGAAGTCGTTGGAGGTGTCCGTGACGTCTCAAGTGAGTAGGAGAGTTGCGGATGAGTATGATCACAGTTTGAGGAGTCCATACAACAAGAATTCGCAGTCGTGGAGCACCAGCCACAGCGCTATGTTTCTCAAGTTCACTCCTTCACGACTCAGGAATAATAAAGAGTCCAAGCCACAAAATAATCCTGCAAGGCATGGTTCCTCACCAGGGTACTACACATACTCAAGCGAGATTCTGGCAGCGACACCAACCCCTCACAGCAGCGACTACACTGTGAATGAAAACGACTACCTCACCCCAGCAAACGGCGCTGCCTCGCCGGAGCAGTTGGGTCCGAAATTCGCCAACTCCTTCCTCTCGGAAACCTGGATCCTGATGCGGCGCAACTTCATCAACATCCGAAGAACCCCTGAACTGTTCCTGTCGCGCCTCATGGTACTCACCATCATGGGCTTCATGATGGCCACAATGTTTCACAACCCCAAACAGAATCTCCAGGGAATCACCAACCGCCTTAGCTTCTTCATCTTCACCGTCTGCCTCTTCTTCTTCTCCTCAAACGACGCCGTCCCCGCCTTCATCCAAGAACGCTTCATCTTCATCAGAGAAACCTCCCACAACGCCTACAGAGCCTCTTCCTACACCATCGCCGGCTTAATCACTCACATGCCTTTTCTTCTCCTCCAAGCTTCCGTTTACGCCGCCATTGTTTGGTTTGCCCTAACCCTAAGAGGTCCTTTCTACTACTTCCTCATCGTCCTCTTTGTCTCGCTTCTCTCCACCAACTCCTTCGTCGTCTTCATCAGCTCCGTTGTTCCCAACTATATACTAGGTTACGCTGCAGTCATTGCTTTCACTGCCTTGTTCTTCTTATTTTGTGGATACTTCTTGAGCAGCCATGATATACCGGTTTACTGGCGGTGGATGAACAAGATTTCCACCATGACTTACCCTTATGAAGGACTACTAATGAACCAGTATCAGACAAACATTACTTTTGGGCACAACAATGGCATCAACATAACTGGTTTTGGAATCTTGAATAATCTTCACATTGGGACTGAGAAGTATAAGAAGTGGGAGAATGTGGGAATCATGTTAGGTTGGGCTGTGTTATATAGGCTTTTGTTTTACATGGTGCTTCGATTTGGATCTAAGAACCAGAGGTCCTAG 2196 0.505 MMPPPPPETVIDIKNSNKTAQQTVGFSGGLEFWNLTYTVSKKLKVEGKWSSEDVDLLHDITGYAPKGCITAVMGPSGAGKSTFLDGLAGRIKSGSLKGRVSLDGASVSASLIKRTSAYIMQDDRLFPMLTVYETLMFAADFRLGPLSLADKRHRVDNLIDQLGLSTSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARSGSTVILTIHQPSSRIQMLLDHLIILARGQLMFQGSPNDVTQHLTRMSRRVPKGENPIEHLIDVIQEYDQCEVGVEALAEFARTGMKPPPLKEGVSVEPSPSPVRAWHGRGYEEKSLEVSVTSQVSRRVADEYDHSLRSPYNKNSQSWSTSHSAMFLKFTPSRLRNNKESKPQNNPARHGSSPGYYTYSSEILAATPTPHSSDYTVNENDYLTPANGAASPEQLGPKFANSFLSETWILMRRNFINIRRTPELFLSRLMVLTIMGFMMATMFHNPKQNLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGLITHMPFLLLQASVYAAIVWFALTLRGPFYYFLIVLFVSLLSTNSFVVFISSVVPNYILGYAAVIAFTALFFLFCGYFLSSHDIPVYWRWMNKISTMTYPYEGLLMNQYQTNITFGHNNGINITGFGILNNLHIGTEKYKKWENVGIMLGWAVLYRLLFYMVLRFGSKNQRS* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0051 731 Pfam ABC-2 type transporter 237 294 IPR043926 GO:0140359
Amo05g0051 731 Gene3D - 38 310 IPR027417 -
Amo05g0051 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 274 IPR027417 -
Amo05g0051 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 8 725 - -
Amo05g0051 731 MobiDBLite consensus disorder prediction 317 336 - -
Amo05g0051 731 Pfam ABC-2 type transporter 463 668 IPR013525 GO:0016020|GO:0140359
Amo05g0051 731 Pfam ABC transporter 57 208 IPR003439 GO:0005524
Amo05g0051 731 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 280 IPR003439 GO:0005524
Amo05g0051 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 8 725 - -
Amo05g0051 731 CDD ABCG_EPDR 30 262 - -
Amo05g0051 731 ProSitePatterns ABC transporters family signature. 180 194 IPR017871 GO:0005524
Amo05g0051 731 SMART AAA_5 66 265 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0051 Amo-Chr5 560115 563111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0051 50 294 Calmodulin-binding Proteins AT2G36910 26.210 1.33e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0051 K05681 - gmx:100804809 1113.6