Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0044 ATGGCCAACTCCGACCAAAAACTCCTAATGATCTTCATGTTTTCACTCATGTTCATAACCATTGCCAAATCAGACTCATTGTCCTTCAACTACCCACGTTTCACGCCGGGTCTTAGAAATCTTCTGTTGGACGGTGAAGATTCTAGCATTTCAGATGGAGCGCTACACCTGACCAAAACCGATCCCAATACAGGCAAAGCACTTCCAGACCGTTCTGGTTTGGCCGCATTTTTTGGAGCAGTTCGGCTCTTCAACAACCGAACCGGCAAAGTTGCAGACTTCACTACAGAGTTCACCTTCACCGTGAAAACAAACGGTGTGCAACCTCACGGCGACGGGTTCACCTTTTTCCTCGCATCACTCGATTATGAGTTCCCAGACAACTCGAGTGGCGGATTCCTTGGACTCTTCAACTCTCAAACTGCATTCAATGCCTCTGCAAACCAGGTTGTGGTGGTTGAGTTTGATACCTTTGGGAACACTTGGGATCCTCCCTACTCACCATACCCTCACATAGGAATCGATGTTAACAGCGTCAGATCGGTGGCCACTGCAAAATGGCCAATGGATTCTGAACCAGATGGTGCAATAGGGAAAGCATCTATAAGATATGGGTCATCTTCAAAACTGTTGAGTGTGATTGTTTCTTATCCAAACAGTACCGTACCTGTAACTACTTTATCGTATCCGGTTGATTTTGCGAATGCTCTGCAATCGGAATGGGCGCTTGTTGGATTTTCTGCTTCTACTGGTGATTTGGTTGAGACACATGACATTCTTTCATGGTATTTCCTACTGCTTGGAACCGACGAGAAGAGAAAAAATGGAATGCATTACCGTACCTATAACTACTTTATCATATATATCCGGTTGATTTTGCGAATGCTCTGTAATCGGAATGGGCGCTTGTTGAATTCTCTGCTTCTAGTGGGCCTATATAACACATCCACCAGAGCCTCCTCCGGCAACCAGATTGTTCACGTTGAATTTGATTCTTTCTCCAAACCAGAATGGGATCCCAAAACGGAGCATGTTGGAATCAACATCAATTCAATTTCTTCAGCAAATTACACTGCTTGGAATGCTAGCAGGCATAGTAATGACATTGCTGATGCTTGGATTTCATACAATTCAAGAAAGAAGATTCTAAGCGTGTTTACTACTGGCGATCCAAACATAGTTTACAGAGGACAAGCTATCCCTCGTGTTGGAACAATAGAATTGAACAATAACATTGATTACTTATTCCAAGTTGGATCAGCCATATACTCCAAAGATGTTCTACTTTGGGAATCAAGATCAGGAAAACAAGCTGATTTGAAAACACACTTCACCTTTGTTATTGACACTCAAGGCAATTCTCAATATGCTGCTGGCCTTGCATTCTTCCTTGCACCTTCTGGATTCCAAATACCACCAAACTCTGCCGGCGGCTTTCTAGGCCTATACAACACATCCACTGCCGACTCGCTGCGCAATCAGATTGTTCATGTTGAGTTTGACTCCTTCCCTAATCCGGAGTGGGATCCCAAATTGGAGCATGTGGGAATCAATGTTAATTCAATTTCTTCAGCAAACTACACTGCTTGGAATGCTAGCAAGCATAGTAATGACATTGCTGATGCATGGATCGCGTACAATTCAACAAACAAGATTCTAAGTGTGTCATGGAAATACCAAACGACCTCTACCTCTCAAGAGAATACTACCCTTTCTCATCAAATTGATTTGATGAAGGTCTTGCCTCAATCGGTTACAATTGGATTTTCCGCGGCTACTAGTGAGTACACAGAACGACATGTTATTCAGTCTTGGGAGTTCAGTTCTAGTTTGGACGCCGCAGAGCCTGGTAAAGGAAAGAATTCGAAGAAGACATGGAAGGTGGTGGTTGGATCAGTTGTTGCAGGAGCTGTTTTTATTGTGGTAGTTATTTCAACATATGTAATATTTAGAAGATGGAAGAGCAAGAAAAAGGATGCAAAAATAGAGAGGGTGAGCTCTATTAATGATGATTTTGAAAGAGGAGCTGGACCAAGAAGGTTCTCTTATGAAGAGATTGTCTTTGCTACCAATAATTTTTCCCCAAACAGGAAGTTAGGCCAAGGTGGATTTGGAGCAGTGTATAGAGGCTACTTTGCTGATCTAGATTTGGTTGTTGCTGTTAAGAAGATATCAAGTGGATCAAGACAAGGGAAAAGAGAGTATGTAACTGAAGTCAAAGTCATTAGCAGGTTAAGGCATCGGAATCTTGTGCAACTCATAGGTTGGTGCCATGATCAAGGTGAGTTCCTTCTTGTTTATGAGTACATGCCAAATGGTAGTCTTGATTCCCATTTGTTTGGGAATAGGACTCCATTATCTTGGAACTTGAGGCACAAGATAGCTCTTGGATTGGCCTCTGCTATTCTCTATCTTCATGAAGAATGGGAACAATGTGTTATTCACAGAGATATCAAACCAAGCAATGTGATGTTGGATTCTAGTTTCAATGTCAAGCTTGGTGATTTCGGCTTGGCTAAGCTCATAGATCATGAGTTAGGGTCTCAGACATCGGCTTTAGCCGGAACTATTGGCTATATGGCTCCAGAATATATAAGCAGTCGTAGGGCAAGTAAGGAGTCAGATGTGTATGGCTTTGGATTGGTTGCTTTAGAGATTGCCACAGGAAAAAGGGTGTTTGACCTTGTAGATAATGAAGAGAGTCAAAAGGGGTTGGTTGAGTGGGTTTGGGATCATTATGGAAGAGAAGAATTGCATAAGGTTGTGGATGAGAGAGTAGGAAAGGATTTTGATGAGAAAGAAGTGAAGTATATGATGATTGTTGGAATGTGGTGTTGTCATCCTGATAAGAATATGAGGCCATCAATAAGAGAAGCAATTCAAGTGCTGAATTTAGAAGGTCCAGTGCCACAGCTTCCAACAAAGATGCCTGTTGCCATTTATTATATCCCTACATCTTCTGTTAGCTCTGATAATGCATCCATTAGTGTTAGCTTCCAATCATCAGGTCGTTGA 3015 0.4229 MANSDQKLLMIFMFSLMFITIAKSDSLSFNYPRFTPGLRNLLLDGEDSSISDGALHLTKTDPNTGKALPDRSGLAAFFGAVRLFNNRTGKVADFTTEFTFTVKTNGVQPHGDGFTFFLASLDYEFPDNSSGGFLGLFNSQTAFNASANQVVVVEFDTFGNTWDPPYSPYPHIGIDVNSVRSVATAKWPMDSEPDGAIGKASIRYGSSSKLLSVIVSYPNSTVPVTTLSYPVDFANALQSEWALVGFSASTGDLVETHDILSWYFLLLGTDEKRKNGMHYRTYNYFIIYIRLILRMLCNRNGRLLNSLLLVGLYNTSTRASSGNQIVHVEFDSFSKPEWDPKTEHVGININSISSANYTAWNASRHSNDIADAWISYNSRKKILSVFTTGDPNIVYRGQAIPRVGTIELNNNIDYLFQVGSAIYSKDVLLWESRSGKQADLKTHFTFVIDTQGNSQYAAGLAFFLAPSGFQIPPNSAGGFLGLYNTSTADSLRNQIVHVEFDSFPNPEWDPKLEHVGINVNSISSANYTAWNASKHSNDIADAWIAYNSTNKILSVSWKYQTTSTSQENTTLSHQIDLMKVLPQSVTIGFSAATSEYTERHVIQSWEFSSSLDAAEPGKGKNSKKTWKVVVGSVVAGAVFIVVVISTYVIFRRWKSKKKDAKIERVSSINDDFERGAGPRRFSYEEIVFATNNFSPNRKLGQGGFGAVYRGYFADLDLVVAVKKISSGSRQGKREYVTEVKVISRLRHRNLVQLIGWCHDQGEFLLVYEYMPNGSLDSHLFGNRTPLSWNLRHKIALGLASAILYLHEEWEQCVIHRDIKPSNVMLDSSFNVKLGDFGLAKLIDHELGSQTSALAGTIGYMAPEYISSRRASKESDVYGFGLVALEIATGKRVFDLVDNEESQKGLVEWVWDHYGREELHKVVDERVGKDFDEKEVKYMMIVGMWCCHPDKNMRPSIREAIQVLNLEGPVPQLPTKMPVAIYYIPTSSVSSDNASISVSFQSSGR* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0044 1004 Gene3D Transferase(Phosphotransferase) domain 1 770 985 - -
Amo05g0044 1004 CDD lectin_legume_LecRK_Arcelin_ConA 386 611 IPR001220 GO:0030246
Amo05g0044 1004 Gene3D - 388 630 - -
Amo05g0044 1004 ProSitePatterns Protein kinases ATP-binding region signature. 699 723 IPR017441 GO:0005524
Amo05g0044 1004 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 266 IPR013320 -
Amo05g0044 1004 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 310 385 - -
Amo05g0044 1004 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 390 999 - -
Amo05g0044 1004 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 16 265 - -
Amo05g0044 1004 CDD STKc_IRAK 699 964 - -
Amo05g0044 1004 SUPERFAMILY Concanavalin A-like lectins/glucanases 390 613 IPR013320 -
Amo05g0044 1004 PANTHER - 390 999 - -
Amo05g0044 1004 PANTHER - 16 265 - -
Amo05g0044 1004 Gene3D - 24 277 - -
Amo05g0044 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Amo05g0044 1004 CDD lectin_legume_LecRK_Arcelin_ConA 27 264 IPR001220 GO:0030246
Amo05g0044 1004 Pfam Protein kinase domain 695 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0044 1004 SMART serkin_6 693 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g0044 1004 PANTHER - 310 385 - -
Amo05g0044 1004 SUPERFAMILY Concanavalin A-like lectins/glucanases 310 388 IPR013320 -
Amo05g0044 1004 Gene3D Phosphorylase Kinase; domain 1 678 769 - -
Amo05g0044 1004 SUPERFAMILY Protein kinase-like (PK-like) 677 992 IPR011009 -
Amo05g0044 1004 Gene3D - 305 387 - -
Amo05g0044 1004 Pfam Legume lectin domain 26 274 IPR001220 GO:0030246
Amo05g0044 1004 Pfam Legume lectin domain 389 618 IPR001220 GO:0030246
Amo05g0044 1004 Pfam Legume lectin domain 310 388 IPR001220 GO:0030246
Amo05g0044 1004 ProSiteProfiles Protein kinase domain profile. 693 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0044 Amo-Chr5 489233 502178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0044 383 982 Receptor kinase-like Gene Family AT5G10530 57.401 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo05g0044 Pkinase 1.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0044 - - zju:107425081 798.89