Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0039 ATGGCATCACAGCAACCTGAATTTGAGCATCCTAGGAAGGCATTTGGATGGGCAGCTAGGGATACTTCTGGTTTTCTCTCTCCTTTCAATTTCTCTAGAAGGGAAACAGGAGAGAAAGACGTGGCATTCAAAGTGTTATACTGCGGAATATGCCACTCAGACCTGCACATGGTAAAAAACGAGTGGGGCAATGCCATATATCCTATGGTCCCTGGGCACGAAGTAGCTGGCGTAGTGACAGAAGTGGGAAGCAAAGTACAAAAATATAAAGTTGGGGACAAAGTGGGTGTGGGATGCATGGTTGAATCATGCCGCACTTGCCAAAACTGTGTAGAAGATCTTGAGAATTATTGCCCAAAAAATATTTTTACATATGGTGCCAAATACATTGATGGTACTATCACATATGGAGGCTACTCTGATTCAATGGTTGTTGATGAACACTTTGTGATTCGCATTCCCGAAGCATTGCCTCTTGCTGCTGCTGCTCCTCTCCTTTGTGCTGGGATCACAGTTTATAGCCCACTTAGATATTATGGGCTTGATAAGCCTGGTTTGCATGTGGGTGTTGTTGGGCTTGGTGGGCTGGGCCATATGGCAGTCAAGTTTGCTAAAGCTTTTGGAGCTAAGGTTACCGTCATCAGTACATCACCTAATAAAAAGGACGAAGCAATAAACATTTTGGGCGCTGATTCATTTTTGTTAAGTCGTGACCAAGATCAAATCCAGGCCGCAATGGAAACCTTGGATGGTATTATCGACACAGTATCTGCTGTTCATCCCCTGGTATCTCTTATTGGTTTGCTGAAGTCTCATGGAAAATTAGTAATGGTTGGAGGACCAGAAAAGCCTTTAGAACTACCAATCTTTCCTTTGCTTAAGGGGAGAAAAATCGTAGCCGGTAGTCTGATTGGAGGGTTGAAGGAAACACAAGAAATGATTAATTTTGCTGCTAAACACAATGTGAAGCCTGAGATTGAAGTTATTGCGATTGATTATGTGAACACTGCAATGGAACGCCTCGCCAAAGCTGATGTGAAGTATCGATTTCGTCATGAAAGACGTCAATACTCTTTCAGTGCAGCACTTATAAATAGCGCTCTTGGTTTTATCCTCCATCACCATCATCGTTATTCGTTAAGATCACTAATCAGTGTTACTCTCTTCCAAATGGCAGCAACACAAGTACCTGAATTCGAGCATCCTAAGAAGGCTTTCGGTTGGGCTGCCAGGGACCCCTCTGGTCATCTGTCCCCTTTCCATTTCTCTAGAAGAGAAACCGGTGACAAGGATGTGGCATTCAAAGTGTTGTACTGTGGGATTTGTCACTCGGATCTGCACATGGTGAAGAATGAATGGGGCTTCTCCATCTATCCTATGGTCCCTGGGCATGAAGTTGTTGGTGTAGTGACACAAGTGGGAAGCAAGGTTCAAAAGTATAAAATTGGAGACAGAGTCGGCGTCGGATGCTTGGTTCAATCGTGCCGAACCTGTCAAGACTGTAACGATAATCTTGAAAATTATTGCTCTTCATATACTCTAACATACGGTGCAAAATCCAGCGATGGAACCATCACATATGGAGGTTACTCTGACTCAATGGTTGTTGATGAGCACTTTGTGGTTCGAATTCCAAATGAGTTACCTCTTGATGCTGCTGCTCCTCTGCTATGTGCTGGGATCACAGTTTATAGCCCTCTCAGATATTTTGGACTAGACAAACCTGGCTTGCATGTTGGTGTCGTTGGTCTTGGTGGGTTAGGCCACATGGCAGTCAAATTTGCCAAGGCTTTTGGGGCTAAAGTCACTGTAATTAGTACCTCACCCAACAAAAAACAGGAAGCAATGCAACATCTAGGAGCTGATTCTTTTTTGATAAGTCGCGACCAAGATCAGATGCAGGCTGCAAAGGAAACTTTGGATGGTATCATTGATACAGTTTCAGCTGTTCATTCTCTCGTGCCTCTCATTGGTTTATTAAAGTCACATGGAAAACTTGTAATGGTTGGAGCACCTGAGAAGCCTCTAGAACTGCCAATCATTCCATTACTTATGGGGAGAAAGTTAATAGCCGGTAGTGGTATCGGAGGGTTAAAAGAGACTCAGGAGATGATTGATTTTGCTGCAGAACACAATGTGAAACCTGACATCGAGGTCATTCCTATTGATTATGTGAACGAAGCAATGGAGCGCCTCATCAAAGCAGATGTGAAATATCGCTTCATTCAAATGGCACCATCATCACAACCTGAATTTGAGCATCCTAGGAAGGCTTTTGGATGGGCAGCAAGGGATTCTTCTGGAGTTCTCTCCCCTTTCAATTTCTCTAGAAGGGAAATTGGAGAGAAAGACGTTGCATTAAAAGTGTTGTATTGTGGTATATGCCACACGGACCTGCACATGGTGAAGAACGACTGGGGCAATTCCATCTACCCAATTGTCCCCGGGCATGAAGTAGTTGGCATAGTGAAAGAGGTGGGAAGCAAAGTACAAAAGTACAAAGTTGGAGACAAAGTGGGTGTGGGATACTTCGTAGAATCTTGTCGCTCCTGCCAAAATTGTATTGACAATCTTGAGAATTACTGTCCCAAAAACATTGTAACACAAGGTGCCAAAAACATCGATGGTACCACCACTTATGGTGGTTACTCTGACTCAATGGTTGTTGATGAACTCTTTGTGATTCGAATTCCTGAAGGGCTACCTCTTGATGCTGCGGCTCCTCTCCTTTGTGCTGGGATTACAGTGTACAGCCCTCTTAAATATTATGGGCTTGATAAGCCTGGTTTGCATGTGGGTGTAGTTGGGCTTGGTGGGCTTGGCCATATGGCAGCGAAGTTTGCCAAAGCCCATGGGGCTAAGGTCACTGTCATTAGTACTTCACCCAACAAAAAGGACGAAGCAATAATTCATTTAGGAGCTGATTCTTTTTTGGTTAGTCATGATCTAGAGCAGATGGAGGGTGCAAAGGAAAGTTTGGATGGCATCATTGACACAGTTTCTGCTCTTCATTCCATTATACCTCTAATTGGCTTATTAAAGACTCATGGAAAACTTGTTATGGTTGGGGCAGTTTCGAAGCCTCTGGAAGTGCCAGCCTTTCCTTTGATTATGGGAAGAAAACTTGTTGCTGGTAGTCTGGTTGGAGGGTTGAAAGAGACACAGGAAATGATTGATTTTGCTGCAAAACATAATGTGAAGCCTGAGATTGAAGTTGTTCCCATGGATTACGTGAACATTGCAATGGAGCGCCTCGCTAAAGCTGATGTCAAATATCGATTCGTCATTGATGTTGAAAACACACTAAAACCAAGCTCTTGA 3321 0.4366 MASQQPEFEHPRKAFGWAARDTSGFLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMVKNEWGNAIYPMVPGHEVAGVVTEVGSKVQKYKVGDKVGVGCMVESCRTCQNCVEDLENYCPKNIFTYGAKYIDGTITYGGYSDSMVVDEHFVIRIPEALPLAAAAPLLCAGITVYSPLRYYGLDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKDEAINILGADSFLLSRDQDQIQAAMETLDGIIDTVSAVHPLVSLIGLLKSHGKLVMVGGPEKPLELPIFPLLKGRKIVAGSLIGGLKETQEMINFAAKHNVKPEIEVIAIDYVNTAMERLAKADVKYRFRHERRQYSFSAALINSALGFILHHHHRYSLRSLISVTLFQMAATQVPEFEHPKKAFGWAARDPSGHLSPFHFSRRETGDKDVAFKVLYCGICHSDLHMVKNEWGFSIYPMVPGHEVVGVVTQVGSKVQKYKIGDRVGVGCLVQSCRTCQDCNDNLENYCSSYTLTYGAKSSDGTITYGGYSDSMVVDEHFVVRIPNELPLDAAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKQEAMQHLGADSFLISRDQDQMQAAKETLDGIIDTVSAVHSLVPLIGLLKSHGKLVMVGAPEKPLELPIIPLLMGRKLIAGSGIGGLKETQEMIDFAAEHNVKPDIEVIPIDYVNEAMERLIKADVKYRFIQMAPSSQPEFEHPRKAFGWAARDSSGVLSPFNFSRREIGEKDVALKVLYCGICHTDLHMVKNDWGNSIYPIVPGHEVVGIVKEVGSKVQKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKNIVTQGAKNIDGTTTYGGYSDSMVVDELFVIRIPEGLPLDAAAPLLCAGITVYSPLKYYGLDKPGLHVGVVGLGGLGHMAAKFAKAHGAKVTVISTSPNKKDEAIIHLGADSFLVSHDLEQMEGAKESLDGIIDTVSALHSIIPLIGLLKTHGKLVMVGAVSKPLEVPAFPLIMGRKLVAGSLVGGLKETQEMIDFAAKHNVKPEIEVVPMDYVNIAMERLAKADVKYRFVIDVENTLKPSS* 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0039 1106 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 816 830 IPR002328 GO:0008270|GO:0016491
Amo05g0039 1106 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 463 477 IPR002328 GO:0008270|GO:0016491
Amo05g0039 1106 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 548 714 IPR036291 -
Amo05g0039 1106 Gene3D - 761 1098 - -
Amo05g0039 1106 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 748 1105 - -
Amo05g0039 1106 SUPERFAMILY GroES-like 765 929 IPR011032 -
Amo05g0039 1106 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Amo05g0039 1106 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 323 IPR036291 -
Amo05g0039 1106 Pfam Zinc-binding dehydrogenase 195 318 IPR013149 -
Amo05g0039 1106 Pfam Zinc-binding dehydrogenase 586 709 IPR013149 -
Amo05g0039 1106 Pfam Zinc-binding dehydrogenase 939 1062 IPR013149 -
Amo05g0039 1106 CDD CAD1 406 741 - -
Amo05g0039 1106 PANTHER ALDEHYDE REDUCTASE 397 742 - -
Amo05g0039 1106 SMART PKS_ER_names_mod 18 346 IPR020843 GO:0016491
Amo05g0039 1106 Gene3D - 559 715 - -
Amo05g0039 1106 Gene3D - 168 324 - -
Amo05g0039 1106 Gene3D - 912 1068 - -
Amo05g0039 1106 SUPERFAMILY GroES-like 411 576 IPR011032 -
Amo05g0039 1106 Gene3D - 17 350 - -
Amo05g0039 1106 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 901 1067 IPR036291 -
Amo05g0039 1106 Gene3D - 408 742 - -
Amo05g0039 1106 CDD CAD1 759 1097 - -
Amo05g0039 1106 SUPERFAMILY GroES-like 22 185 IPR011032 -
Amo05g0039 1106 PANTHER ALDEHYDE REDUCTASE 4 350 - -
Amo05g0039 1106 PANTHER ALDEHYDE REDUCTASE 748 1105 - -
Amo05g0039 1106 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 4 350 - -
Amo05g0039 1106 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 397 742 - -
Amo05g0039 1106 CDD CAD1 15 350 - -
Amo05g0039 1106 Pfam Alcohol dehydrogenase GroES-like domain 430 543 IPR013154 -
Amo05g0039 1106 Pfam Alcohol dehydrogenase GroES-like domain 39 152 IPR013154 -
Amo05g0039 1106 Pfam Alcohol dehydrogenase GroES-like domain 783 896 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0039 Amo-Chr5 418564 450049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0039 403 750 Monolignol Biosynthesis Gene Families AT4G37990 69.341 2.05e-156 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0039 - K23232 twl:119999099 1024.23