Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0037 AAGGTTCAACGGTCCGTGAGTTCAAAACGTTTCAACGGTCACCAACTTCGAATTCGAATACCCCCTTGTTCCTCAAGATTTCTAATCTCTGAAACCTTTCTTTCTGCCACACTCTTTCTTTCACTCTTAGAACTTCCGTTATTACCAAAAGATTCAATCCTTAACATGGATCAGATCCAATCAAACAATTTTCAGCAGCAATCACAAGCCCTAACAACAGAGCATAATGACTCAGTAATGGAAGATGCACAAGAGTCCTTGTTCGATTCAGTAGTATGCGATCCCAGTTCAAGACTACTACCAACTGGCCTCACAAGACCTGAAAACTCCGGGGAGGATTATGTCATGTTTGTGAATGCGGGAGAGGAAGATACTAATGAAGCAGACGGTGGACTAACTTTCCTTGGTGACACCTTTTTCGAAGGTGGGAACGTTATGCGTACCAATGAGCAAATAGTGGAGGGTGGAGATTACCCATTTATCTATCAGTCAGCTCGGTTAGGAAACTTTTGTTACAGATTTGATAGTCTTCCTCCTGGAGATTATGTGGTTGATCTTCATTTTGTTGAGATCATCAACATAAATGGACCAAAAGGAATGAGGACTTTCAATGTATACATCCAAGAAGAAAAGGTTCTATCTGAACTGGATATCTTTGCAGCAGTTGGAGCTAATAAGCCACTACAGTTGGTTGACTCAAGGGTTTCTGTGAAAGATGATGGGATAATCCTCATAAGATTTGAAAGTATAAATGGAAACCCTGTCATCAGTGGGATCTGCATTAGAAAACCAGGAAAACCAGCTGCTTCACAACTGACAAACGATTACGTTAAATGTAATTACTGTGCAGCGCAAATTGAAATTCCCGTGTCACAGATGAAGGTATTGCAGACAAAATCTACTGCAAAGTATCAAAACAAGATAAAAGAGCTCACAATGCAATGTGAGCTCAAGGCAAAGGAATGCTATGAGGCATGGATGTCATTAACTGCAACAAATGAGCAACTGGAAGCAGTCCAAATGGAGCTTGACAATGTCACATTTAAGTCACTAACTACTGATCAAACTGTGGAGAAACAAGCTCATGAGCTGAGGAGCATTTCTAGCAGGTATGAAGTTGATAAGAAAAAATGGACAGAAGCAATTAGCAATTTACAGGAGAAAGTAAAGTTGATGAAGAGTGATTATTGTCAACTTTCCCATGAAGCGCATGAATGTGTTGATTCAATCCCAGAATTAAATAAGATGGTATTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACAATGAAGAGATGATAAAGAGAAAAAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTAGGGTTTTCTGCCGCTGCCGTCCCTTGAATAAGGCTGAAATATCAGCTGGCTGTACTACAGTTGTGGATTTTGATGCAGCAAAGGATGGATGCCTTGGAATTTTGGCAACTAATTCCTCAAAAAAATCATTCAGATTTGACAGAGTATATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCCTCATCAATGGTAATCTCTGTATTGGATGGCTACAATGTTTGCATATTTGCTTATGGGCAAACAGGAACAGGAAAGACATTTACCATGGAGGGAACAGAGCTGAATAGAGGAGTAAATTATAGGACTCTTGAGCTGTTGTTCGATGTTAGCAAACAAAGGAGTGATACATTTTCTTATGACATATCTGTTAGTGTACTTGAGGTTTATAATGAACAAATCAGAGACCTATTGGCTACAGGATCAACATCAAAAAGGCTGGAGATAAAACAAGCCTCTGAAGGATCTCATCACGTTCCTGGTGTCGTAGAAGCTAAAGTTGAAAGCATTAAGGAGGTCTGGGATGTACTGCAAGCTGGAAGCAATGCTAGAGCAGTTGGAAGTAATAATGTTAATGAGCATAGTAGTAGATCTCACTGCATGCTTTGTATAATGGTAAAGGCTAAAAATTTGCTGAATGGTGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCGGGTAGTGAGAGACTTGCAAAGACTGATGTGCAAGGGGAGCGGCTTAAGGAAGCGCAAAATATCAATCGATCTCTTTCAGCTCTTGGCGATGTTATATCTGCTTTAGCAGCCAAGAGTAGTCACATTCCCTATAGGAACTCAAAATTGACACATTTACTTCAAGACTCTTTAGGGGGTGACGCCAAAACATTGATGTTTGTGCAAATCAGTCCATCGGACCAGGACTTAGGTGAAACTCTTAGCTCACTTAATTTCGCAACTAGAGTGAGGGGCGTTGAGTTAGGTCCTGTTAAGAAGCAAGTTGACACAAGTGAACTTCAAAAGACAAAAGCAATGCTTGAAAAAGCAAGGAGTGATTGCAGAGTGAAAGATGAATCAATACGGAAGCTAGAAGACAGTTTGCAAAGCATGGAGAGCAAGGCCAAAGGAAAGGATAGTATTCACAGAAATCTACATGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGTTGAAGACATCCATGCAAAACCAGTCAGAAAAACAAATTTCTCAATTGTCAGAGAAATTGAAGGGAAAAGAGGAAACATGCACTACTCTCCAACATAAGGTCAAAGAGCTAGAGAAAAAGATGAAAGAACAACTGCAGTCAGAAACATCAAGTTTTCAACAGCAGATCAAGGAGCTGGAGAGAAAACTTAAAGAGCAGAAAGAGAGCTCGGAGTCCTTGCTTCGGCAGCAGATCAAGGAGCTTGAGACAAAGCTAAATGAGCAAGAACAGAGGTCGGAGTCCTCCCTTCGTCAGCAGATGAATGAACTAGAGAAGAGGTACAGCGAGAGAGAACTGCAGTGGCAACAACAACAACAACAAACTCATTGTTTTGTTGAAGCCGGAAAGGCCACACCCGATGTAGGTAAAAGCCGCATGAGCGGCGGTGAATATCCAAGTGAGAGTGAGGCTCGCATTTTAAAGAGTTCAAACTCAGTAAACCCCCCAACAAGTCAAGCTTCTACTAATCAGATAAGGAGCAAGAGGGAGTTCAGAGGCAATGAAGCAGAGAACAATTATGGCATACCGACATCTTTACATGACAGAAGGGTGACAAGGAAATCTGATCCACCAAGGGTAGCTAGGGTTGTGAGGCCAACAACAAAGCCAGTGATTGCTGCTCAAGCAGCCCCAGTGTCTCATAAGAGAGCTAGCACTAGTAGGGATCAGGTTCAAGGAATTAAAGAGAGGGAAACTAAGAAGAAAATTTGGTCAAGATAG 3300 0.4112 KVQRSVSSKRFNGHQLRIRIPPCSSRFLISETFLSATLFLSLLELPLLPKDSILNMDQIQSNNFQQQSQALTTEHNDSVMEDAQESLFDSVVCDPSSRLLPTGLTRPENSGEDYVMFVNAGEEDTNEADGGLTFLGDTFFEGGNVMRTNEQIVEGGDYPFIYQSARLGNFCYRFDSLPPGDYVVDLHFVEIININGPKGMRTFNVYIQEEKVLSELDIFAAVGANKPLQLVDSRVSVKDDGIILIRFESINGNPVISGICIRKPGKPAASQLTNDYVKCNYCAAQIEIPVSQMKVLQTKSTAKYQNKIKELTMQCELKAKECYEAWMSLTATNEQLEAVQMELDNVTFKSLTTDQTVEKQAHELRSISSRYEVDKKKWTEAISNLQEKVKLMKSDYCQLSHEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYNEEMIKRKKLFNEVQEAKGNIRVFCRCRPLNKAEISAGCTTVVDFDAAKDGCLGILATNSSKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTELNRGVNYRTLELLFDVSKQRSDTFSYDISVSVLEVYNEQIRDLLATGSTSKRLEIKQASEGSHHVPGVVEAKVESIKEVWDVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVKAKNLLNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDAKTLMFVQISPSDQDLGETLSSLNFATRVRGVELGPVKKQVDTSELQKTKAMLEKARSDCRVKDESIRKLEDSLQSMESKAKGKDSIHRNLHEKIKELEGQIELKTSMQNQSEKQISQLSEKLKGKEETCTTLQHKVKELEKKMKEQLQSETSSFQQQIKELERKLKEQKESSESLLRQQIKELETKLNEQEQRSESSLRQQMNELEKRYSERELQWQQQQQQTHCFVEAGKATPDVGKSRMSGGEYPSESEARILKSSNSVNPPTSQASTNQIRSKREFRGNEAENNYGIPTSLHDRRVTRKSDPPRVARVVRPTTKPVIAAQAAPVSHKRASTSRDQVQGIKERETKKKIWSR* 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0037 1099 Pfam Kinesin motor domain 460 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo05g0037 1099 PRINTS Kinesin heavy chain signature 677 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo05g0037 1099 PRINTS Kinesin heavy chain signature 726 747 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo05g0037 1099 PRINTS Kinesin heavy chain signature 528 549 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo05g0037 1099 PRINTS Kinesin heavy chain signature 646 663 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo05g0037 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 454 783 IPR027417 -
Amo05g0037 1099 SMART kinesin_4 452 784 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo05g0037 1099 Pfam Malectin domain 115 259 IPR021720 -
Amo05g0037 1099 Gene3D Kinesin motor domain 397 778 IPR036961 -
Amo05g0037 1099 PANTHER KINESIN-LIKE PROTEIN KLP-3 82 1085 - -
Amo05g0037 1099 MobiDBLite consensus disorder prediction 997 1020 - -
Amo05g0037 1099 MobiDBLite consensus disorder prediction 1081 1099 - -
Amo05g0037 1099 Coils Coil 368 395 - -
Amo05g0037 1099 CDD KISc_C_terminal 452 778 - -
Amo05g0037 1099 MobiDBLite consensus disorder prediction 978 1099 - -
Amo05g0037 1099 Gene3D - 110 264 - -
Amo05g0037 1099 PANTHER KINESIN-LIKE PROTEIN KIN-14R 82 1085 - -
Amo05g0037 1099 Coils Coil 420 440 - -
Amo05g0037 1099 Coils Coil 853 967 - -
Amo05g0037 1099 ProSiteProfiles Kinesin motor domain profile. 454 776 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo05g0037 1099 ProSitePatterns Kinesin motor domain signature. 676 687 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo05g0037 1099 MobiDBLite consensus disorder prediction 931 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0037 Amo-Chr5 390853 397395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0037 370 797 Calmodulin-binding Proteins AT5G65930 39.207 2.18e-86 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0037 K10406 - gmx:100800016 1573.53