Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0019 ATGGCCCTTCCCGGTTCTCTGCAGCTGACCCATGGACTGGGACTTTGCAGGAAACCAGGCCGCCATAAACATCCGTCGGTTGTGGGAAGAAGCAAGCTACATTTACTGAATACAGGCCCATCATATCTTCTTTCGTTCATGAAACTGGATAGCTGGGGGATTCGACAATTTCATCACATTAACAGGCCAACATATACATTATCTTACAAGTCTCGCCCATTTACGTGCCATTCTCTTCTAGTACCAAGCCAACCAAGTGAGCTACCTGTTGTTAAGGTGGCTGCTACGTTGTTGGCAAGGTCTATTAATCAGATACATAGTAATCCTGTAATATTAAAGTTGATGCCTTCAGTTGCCATTATCATTTTTGCAACATGGGGTGTTGGTCCATTAGCATGTCAGATAAGGAAATTGCTTTTCCAGAGGAGTGATAATAGTTGGAAGAAAAGTAAAACACATTATATAGTAACTTCTTACCTTCGACCATTACTTTTATGGACTGGAGCAATACTCTTTTGCAGAGCATTGGAACCAGTAGTTCTACCTACAGAAACTAGCCAGGTTATTAAGGAACGGCTTCTGCATTTTGTAAGATCATTGTCAACTGTTCTGGCCTTTGCCTATTGTTTATCAAGTGTGATTCAGCAAATGCAGAAATTCTTATCTGAGAGCACTGATCCAAGTGAGACGAGAAATATGGGATTCCAATTTGCAGGAAAAGCTGTCTATTCGGCCGTATGGATTGCAGCTTTTTCACTGTTCATGGAATTGCTAGGCTTCTCTACACAGAGATGGGTTACTGCTGGAGGTCTTGGGACAGTTTTGTTGACTCTTGCCGGTCGTGAGATATTTACAAATTTCCTTTCAAGTGCGATGATCCATGCAACTCGTCCTTTTGTGATTAATGAGTGGATTCAAACAAAGATTGAAGGATATGAAGTTTCTGGTACCGTTGAGCATGTTGGCTGGTGGTCACCTACTATTGTAAGAGGTGAAGATGGTGAAGCTGTACACATTCCAAACCACAAATTCACAGTGAATGTTGTGCGAAACCTCACTCAGAAAACACATTGGCGAATCAAAACCCATTTAGCCGTTAGTCATTTGGATGTAAAAAAGATTAATAATATTGTTGCCGATATGCGAAAAGTACTAGCGAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGGGTGTTCCTTGACAATATAAATCCTGAAAATCAGGCCCTTTTGATATTGGTGTCATGTTTCGTCAAGACCTCACATTTTGAAGAATATTTATGTGTTAAGGAAGCTATACTGTTGGATCTTCTTAGAGTTATTGGTCATCACAGAGCCCGTCTTGCAACACCAGTTCGCACCCTGCAGAAAATATACAGTGATGCTGAATTGGACAACATACCATACTCAGATTCCCCAATTAGTGGTGCCGGAACTGTATCTAACCGTCCATTATTAATGATTGAATCACCTAACAAGATCAATGCAGATGATAAAGCAAAAGTCCGATCAGCACGAGCAGCTGGAGATCAAGATAACAAGGCAACTGTGCAAACCAGACTTGAAATGAAGGTTGGTTCATCAGGAATACAAGATGACTCCGAGGTGGATGCCAAAGTCGCTACATCTAATTCTATCACAAACGGAAATGCCAAGACTGTGTTGACACCCAAGCCTGATCCTGAAGTGGGTGAGAACAAGCCGATAAAACCAGATTCCAAGGGTCAGGCTGTTAAAAACATCAAGCCTAATATTGAATCCGAGAGTGTAGTTTCCTCCTCGGGAACAGGCAATGTCGATAAAGCCGGTGGAGTTCCTACGAATACACCAACAAAGCAACAAGGGGAAAGGAAACTGGCTACACAACCTCCTCCGGCATCAAGGCCTGTTCTTGAAGAGAATATAGTACTTGGTGTTGCATTGGAGGGATCAAAGAGGACCCTTCCTATTGAGGAGGGTATTGAGACTTCCGCAACTAGAGAGGCAAAGGAAATGGCTGCTTCCCATGGTGGAAATGGATCTCCAAAGGGCGGGGATGGAAATGACAAGAAAAATTTATAG 2067 0.4257 MALPGSLQLTHGLGLCRKPGRHKHPSVVGRSKLHLLNTGPSYLLSFMKLDSWGIRQFHHINRPTYTLSYKSRPFTCHSLLVPSQPSELPVVKVAATLLARSINQIHSNPVILKLMPSVAIIIFATWGVGPLACQIRKLLFQRSDNSWKKSKTHYIVTSYLRPLLLWTGAILFCRALEPVVLPTETSQVIKERLLHFVRSLSTVLAFAYCLSSVIQQMQKFLSESTDPSETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQRWVTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFVINEWIQTKIEGYEVSGTVEHVGWWSPTIVRGEDGEAVHIPNHKFTVNVVRNLTQKTHWRIKTHLAVSHLDVKKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTSHFEEYLCVKEAILLDLLRVIGHHRARLATPVRTLQKIYSDAELDNIPYSDSPISGAGTVSNRPLLMIESPNKINADDKAKVRSARAAGDQDNKATVQTRLEMKVGSSGIQDDSEVDAKVATSNSITNGNAKTVLTPKPDPEVGENKPIKPDSKGQAVKNIKPNIESESVVSSSGTGNVDKAGGVPTNTPTKQQGERKLATQPPPASRPVLEENIVLGVALEGSKRTLPIEEGIETSATREAKEMAASHGGNGSPKGGDGNDKKNL* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0019 688 Gene3D - 194 297 - -
Amo05g0019 688 MobiDBLite consensus disorder prediction 582 622 - -
Amo05g0019 688 MobiDBLite consensus disorder prediction 651 688 - -
Amo05g0019 688 MobiDBLite consensus disorder prediction 544 633 - -
Amo05g0019 688 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 575 685 IPR045042 -
Amo05g0019 688 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 577 IPR045042 -
Amo05g0019 688 Pfam Mechanosensitive ion channel 240 446 IPR006685 GO:0016020|GO:0055085
Amo05g0019 688 Gene3D - 298 351 IPR023408 -
Amo05g0019 688 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 575 685 - -
Amo05g0019 688 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 577 - -
Amo05g0019 688 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0019 Amo-Chr5 197713 203751 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0019 9 675 Mechanosensitive Ion Channel Family AT5G10490 54.985 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0019 K22047 - gmx:100789444 988.023