Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0012 ATGGCGGACCAGAGGAACCAATGGAGCTGGGACGTCACCGGCTTCGAGCAGTTGAAGCCGCAGTCGCCGGAAGGAGGCAATCAGAGGCTGAATGCGTCGCCAACGAGATGGCAGTCCATGTCCTCCTCTCTACCTCCGCCGCAATCCGTGGCTTCCAAGGTTCAGCGATTGAAGGACAATGTTAAGGCATGTCTTAATAATCTCATCAGGTACTTTGCACAGCTTGCTAGAAAAAACTACTTGCAGTTAAGACAAGAAGCAACTGAACTTCAGGCATATGCAAATGCAAAGCTTGATCGAGTTACACGATATCTTGGTGTTCTTTCTGAGAAATCCCGCAAGTTAGATCAAGCTGTCCTTGAAACTGAAGCAAGAATATCTTCAATGATCTATGAAAAAAAGAGATTATTCAATGACTTATTGACATCCAAAGGCAACATACGTGTTTTCTGCCGCACAAGACCATTATTTAAAGATGAAGGTCCTTCAGTCATTGAATTTCCCAATGATTTTACTATCCGTGTAAATACTGGTGATGAATCTTTATCTCACTCCGAGAAAGATTTTGAATTTGACAGAGTTTATGGTTCTCATGTTGGACAGGCTGAGTTGTTCACAGATGTTCAGCCACTAGTGCAATCAGCATTGGATGGATATAATGTTTCAATATTTGCATATGGACAAACCAATTCTGGAAAGACGCACACAATGGAAGGACCAGACTATGATCGAGGTCTATATGCTCGTTGTTTTGAGGAGCTGTTTGATTTAGCCAACTCAGATTCAACTGCCACTTCTCAGTACCAATTTAGCATTACCGTTTTTGAGCTCTATAATGAACAGGCTAGAGATCTTGTCTTGGTGTCAGGGAAAAGCAAGCCTAAAGTCTCTTTTGGATTGCCTGAATGTTTCATAGAACTAGTGCAGGAAAAAGTTGATAACCCTCCAGAGTTTGTTAGGGTTTTGAAAGCTGCATTTCAGAGTCGAGGAAATGATACACTAAAGATTAATGTTTCTCATTTGATTGTCACAATACACATATTTCATAACAATTTGATCAACGGTGAAAACTCATATAGCAAACTCTCTCTTGTTGATTTGGCCGGAAGTGAAGGTTTAATAACGGAAGATGATAGTGGTGAGCGTGTCACAGATTTGCTGCATGTTATGAAGTCACTTTCAGCTTTGGGAGATGTTTTGTCTTCTTTGACCTCAAAGAAGGATGCTATTCCTTATGAGAACTCATTGATAACCAAACTGCTTGCAGACTCGCTTGGTGGGAGTTCAAAAACACTGATGATAGTGAATTTATGTCCAAGTATTTCAAATTTATCCGAGACATTATCGTCTGTCAGTTTCTCTGCCAGAGCACAAAATTCTGTACTAAGCCTTGGAAACCAAGTTACAATGAAGTGGGGAGATGATGCGAATGATTCCCGGAAGGAATTGTATGCAAGAGAGAAAGAAGTCCAAGATCTGAAGGAAGAGGTTCTGGGACTTAAGCAGTTGCTTAAAGACGCAAATGATCAGTGTGTTCTACTCTTCAATGAAGTTCAGAAGGCATGGAAAGTTACTTCTACATTGCAGACAGATCTAAAGGCAGAGCATATTCTTCTGGAAGATAATCATAACATAGAGAAAGAACAAAGTGCTCAGCTTAGAAATCAAGTTTCTCGTCTGTTACAGTTAGAGCAAGAACAAAACTTGAAGATACAACAGCGGGATTCAACCATCCAAACCTTGCAGGCTAAAATTGGAACCCTTGAAGCACGATTCAATGAAGTTCTTAGATCCAGCAGTACTGGGTCAAATGGCATGAATTCCATTGGTAGTGGGAATGACATGAATTCTTCTACAGTAAACATGAAACTGGAAGCAGAACTCAAGAAACGCGATGCTCTAATTGAGAGGTTGCACGAAGAAAATGAGAAATTATTTGATAAATTAACAGAGAAAAAGTCTTTGTCTGGATCGCCTCAGTTTTCAAGTACATCATCCAAGGGATCAGTTAATGTTCAGCCTCAAAATATAGGGAGCAATAATACAAGATCTCGTTCCATGGATGTTCTTCCTTCACCCTTGGTGACAGATAAAAATGCTGGCACATTTGCTATAGTTAGATCTGGTTCTGAGAAAGATAAGGTTACCCCAGCGGGTGAATATCTTACTGCTGCCCTGAATGACTTTAATCCAGATCAATATGATGGCCATGCTGCCATTGCTGATGGTGCAAACAAGCTTCTGATGCTGGTTCTAGCTGCAGTCATTAAAGGTGGTTCCTTCAGGGAACATGAGATACTTGCTGAAATTAGGGATGCTGTTTTCTCTTTTATTCAGAAAATGGAGCCAAAGCGAGTAATGGATACAATGCTTGTTTCCCGTGTTAGAATCCTCTATATACGATCTTTGATTGCTAGATATCCAGAGTTGCAATCCATTAAGGTCTTGCCAGTTGAGTGCTTTCTAGAAAAGGCTAATTCTGGACGCAGTAGAAGTTCCAGCAGAGGGAGTAGTCCTGGAAGATCTCCTGTGCAGTATTTTGATGAGCAGATTCGAGGATTTAAAGTGAATATAAAGCCTGAGAAGAAGTCCAAATTTTCATCTGTTGTTTTGAAGATTCGTGGAATCGATGAGGACACCTGGAGACAGCAGGTAACTGCTGTAAAGTTGAGGGAAATTACTGAGGAAGCGAAAGGTTTTGCAGTGAGCTGCAGCGTCAAATTAGAATCTGGCTTGCAGAGAGCTTTGATTTTCTCTCTCTTACTGCAAATGATGCACCTGGGGGATCAACTGGATATTGCTGGTACCCTGGGAACAGAAGAGGCCGACAATGCAGCACAGGTGGCTAAGTTGCGTTCAGCTCTAGAATCTGTTGATCTCAAAAAAAGAAGGATTTTACAACAAATGAGAAGTGATGTAGCTTTATTTACACTGGAAAATGGTGATTCACCTGTGCAAAGTCCTTCTACTGCCGCAGAAGATTCACGACTGGCATCTCTCATTTCACTTGATAGCATATTGAAGCAAATAAAGGATATAACAAGACTTTCTAATATGAATACCATCGGGAGAAGTAAAAAGAGAGCAGTGCTAGTTTCTCTTGATGAACTAACACAACGGATGCCTTCCCTTCTTGAAATTGATCAACCCTGCGCTCAGAGGCACATCGCAGATGCTCGCCGCATGATTGAGTCAATTCCTGAAGATGAAAGCAGTATAGGCAAACCAGTAACAGACCTGGGTTCTGGCTCTGAAACTGATGTGACACAGTGGAACGTCCTCCAATTTAATACTGGCAATACCTCACCATTTATCATCAAATGTGGAGCAAACTCAAATTCAGAACTAATAATCAAAGCTGATGCTCGAGTTCAGGAACCTAAAGGAGGTGAGATCGTGAGGGTCGCACCTAGACCATCCGTGTTGGAAGATATGAGCTTGGAGCAAATGAAACAGGTATTTGCGGAACTACCTGAGGCTCTAAGCTTGCTTGCTTTGGCAAGGACGGCAGATGGCACTCGAGCACGATATTCTAGATTATATAGGACTTTAGCCATGAAGGTTCCATCCCTTAGGAACCTGGTCAGTGAGCTTGAAAAAGAGGGTGCCCTGAAAGATAAAATGTCGGTGCCTCGAACATCGTGCACTAAGCTCACACTCATAACGGTAGGAGCAGTCATCTTGCAGTTCTTTGGCCTCTCCGTTTTCCTCTTCGCCTTCTTCCCCGTCAAACCCACCCTCTCCGGCCACAGTGGTTTGGAGAGTCTCCGACCTCCATCCTGCAACGCTGGTGGCGCTTCAAATCGGAGCGAGGCTTCTCTGCCTCCTGATCAGCTCAGGTCGTTGTATCAGGAAGTATCTGAGATCCTTCCTCCATATGATCGACTCATCTTAATGGTAATTGATGCTCTTCCGGCAGAATTTGTGCTTGGCAAGAATGGGAAGCCTCCAAGAAAGGCTTTTATGGAAGCCATGCCATATACCCAGTCATTGTTGGCAAATGGTATGGCCGTTGGATATCATGCAGTAGCTGTGGCTCCAACCGTTACCATGCCTCGTTTGAAGGTTAAAGATACTGTGCAAGTAGACCAAAATGTGTCTCGACATCTTGGTGAAGAGCTTAGCAGAGATGATTGGAACATTCTGATTCTTCATTATCTAGGCTTGGATCATGTTGGACATATCGGTGGCCGCAACAGTGTGTTAATGGTTCCAAAACTTTCTGAAATGGATGAAGTGGTGAAGATGATTCATACGAAGACCTCTCAAACCCTAGGAAAAGAGCAGGGACAGACACTTCTGGTTGTTGTCAGTGACCATGGAATGACTGAGACTGGTAATCATGGTGGTTCCACATATGAGGAGACAGACTCACTAGCTCTATTTATCGGCCTGAAATACCATGCCTCTTACCATGCATTCTCCAATCATGACACAGTATCTCAGGTTGATATTGCACCTACACTTGCTTTACTTTTTGGTGTGCCAATACCTAAAAATAATATTGGCATTTTGATCTCCCAAATGATGGACTCTCTGACAGATGAACAAAAGTTGAGGGCACTGCAGTTGAACTCATGGCAGCTATTCAGATTACTTCAAGCACAGTTGCCTGGTTTGTCTTGCAGAAATTTTCCATGTGATGGCTTTGTTTCCGATGGTGGACCCTCAGTTGGTGAATGCAAAGGTAGTGACGAGAAATTGTTTTGTTGCTTGTATTTAAACGCCGCCACTCTTCATGATGGTTGGAAGGCTAAAGTAGCCAACAGGTCTAGTCATGGAGAAGGCTACAGTGGCATTACTGCAGCATATAATGAGTTTTTGAGCAGAGCTCATGAGTGGCTATCACGCAAAGCAACTGATAAACCAGTGAGTTTACTTGTTCTTGGACTTTCTGCTTTGATCACATCATCCTTAATACTGCTGAGACATGTATTCATCATCCACAAAGAAGTTCCTGCTGGGGGAATACAAGATGCTGGCAATAATATGAAGCAATGGAATTTGGATGAGGTTTTCATCTTGTTTAGCATCATCATCGTTGCAATGAGTATGGAATCGAGTTCCATGGTTGAGGAAGAGCATTATATTTGGCATTTTCTAACTGCTACCGTTATTTTGTTATTTCTTCGGAAATCAATAGCATCATCGAAACTTAATAAACCACATGATCATCTCAATTCAGTAAAGGGACGAAATATATCAGGATGCTACCAAATGAGTTCATTATTGCTTATTCTTTTTTGTGGAAGAATTTTGAGGGGCTGGCATCAAGGTGGTGTGAATTGGACTTACCTTCCTGACATTTCAAAGTGGCTTGAACAGGCTGGCAATCATTATATAACAATGATTCGTCTAGCATCATGTGTTATGATAATCATTTTAGCCGCACTTGTATTGTACTTCATGCAGTCCAAAATGAAAGTTGTAATGGTGACTGGTTTGAGCTTGTTGGTGTCGGGGTTTTTGATATTGCAACATTTCTTGAAACATCCAGAGCTCTCTGCAATAGACAACAAGGACACTACCTTATCGATACAAATATTTGATGCCATTCATGGAACCATATCTGTTATAGTTGCATTGATTTTGCCATGGACTATTCCCATTAAGACTCCTGAAATGTCCTCGAGATGGAACTCCTATGTACGTGATGCTGCTCCTGTTGAGACTCAGAGCATGGCAACAAATTTAGTGTTAAAAGATTGCTTGTACGTGGTGGGGTGCATGTACGTAACTTCCTGGTGTCTTCTGCAGTTGTTACTCCAACATCCCATGAATGCAATGCCGGTTTTCTTACTCTATGTTCAAGTTGTGGCCAGCATGCAAACTTTTTCTTCATGGCTACATCATAATCAGTGGGTTGAGATTACATTGCTGTACAGCATGGGAATGGCAGGACATTTTGCTCTTGGGAACAGCAACACGCTAGCTACCATTGATGTTGCCGGAGCTTTTATTGGAATTTCAAGTCACTCAACCTTCCTTTCAGGTGTTCAAATGTTCATGATTACTTATGCATCCCCAATGCTGTTCCTTCTTAGTATGGTTATGTACATCTCCATCAAGATGTCAATAAATCTTCCAGTTACCAAGGAGGGAAATTCCGGAGAAATTCTCAAGAATCTTCTTGTATTTCCTTGTCTAGTTCCTCTGAGCATAAATTCTGTTCTCTTGACTTCATACACTATTGTCTTGCTGATGATGAGGAACCATTTATTTATATGGAGTGTCTTTTCTCCCAAGTACCTTTATGTTTGTGCTGCAACGGCCTGTGTGTATATTGGGGTCTTCATTGTAGCTGCAACAGTGAGTCATACATATGTGGTGCTTTTTCATCTGAGAAAGAGCTTCCGCATAACTAGCAAGGAAAATGGTACGCGCGATTAG 6390 0.4196 MADQRNQWSWDVTGFEQLKPQSPEGGNQRLNASPTRWQSMSSSLPPPQSVASKVQRLKDNVKACLNNLIRYFAQLARKNYLQLRQEATELQAYANAKLDRVTRYLGVLSEKSRKLDQAVLETEARISSMIYEKKRLFNDLLTSKGNIRVFCRTRPLFKDEGPSVIEFPNDFTIRVNTGDESLSHSEKDFEFDRVYGSHVGQAELFTDVQPLVQSALDGYNVSIFAYGQTNSGKTHTMEGPDYDRGLYARCFEELFDLANSDSTATSQYQFSITVFELYNEQARDLVLVSGKSKPKVSFGLPECFIELVQEKVDNPPEFVRVLKAAFQSRGNDTLKINVSHLIVTIHIFHNNLINGENSYSKLSLVDLAGSEGLITEDDSGERVTDLLHVMKSLSALGDVLSSLTSKKDAIPYENSLITKLLADSLGGSSKTLMIVNLCPSISNLSETLSSVSFSARAQNSVLSLGNQVTMKWGDDANDSRKELYAREKEVQDLKEEVLGLKQLLKDANDQCVLLFNEVQKAWKVTSTLQTDLKAEHILLEDNHNIEKEQSAQLRNQVSRLLQLEQEQNLKIQQRDSTIQTLQAKIGTLEARFNEVLRSSSTGSNGMNSIGSGNDMNSSTVNMKLEAELKKRDALIERLHEENEKLFDKLTEKKSLSGSPQFSSTSSKGSVNVQPQNIGSNNTRSRSMDVLPSPLVTDKNAGTFAIVRSGSEKDKVTPAGEYLTAALNDFNPDQYDGHAAIADGANKLLMLVLAAVIKGGSFREHEILAEIRDAVFSFIQKMEPKRVMDTMLVSRVRILYIRSLIARYPELQSIKVLPVECFLEKANSGRSRSSSRGSSPGRSPVQYFDEQIRGFKVNIKPEKKSKFSSVVLKIRGIDEDTWRQQVTAVKLREITEEAKGFAVSCSVKLESGLQRALIFSLLLQMMHLGDQLDIAGTLGTEEADNAAQVAKLRSALESVDLKKRRILQQMRSDVALFTLENGDSPVQSPSTAAEDSRLASLISLDSILKQIKDITRLSNMNTIGRSKKRAVLVSLDELTQRMPSLLEIDQPCAQRHIADARRMIESIPEDESSIGKPVTDLGSGSETDVTQWNVLQFNTGNTSPFIIKCGANSNSELIIKADARVQEPKGGEIVRVAPRPSVLEDMSLEQMKQVFAELPEALSLLALARTADGTRARYSRLYRTLAMKVPSLRNLVSELEKEGALKDKMSVPRTSCTKLTLITVGAVILQFFGLSVFLFAFFPVKPTLSGHSGLESLRPPSCNAGGASNRSEASLPPDQLRSLYQEVSEILPPYDRLILMVIDALPAEFVLGKNGKPPRKAFMEAMPYTQSLLANGMAVGYHAVAVAPTVTMPRLKVKDTVQVDQNVSRHLGEELSRDDWNILILHYLGLDHVGHIGGRNSVLMVPKLSEMDEVVKMIHTKTSQTLGKEQGQTLLVVVSDHGMTETGNHGGSTYEETDSLALFIGLKYHASYHAFSNHDTVSQVDIAPTLALLFGVPIPKNNIGILISQMMDSLTDEQKLRALQLNSWQLFRLLQAQLPGLSCRNFPCDGFVSDGGPSVGECKGSDEKLFCCLYLNAATLHDGWKAKVANRSSHGEGYSGITAAYNEFLSRAHEWLSRKATDKPVSLLVLGLSALITSSLILLRHVFIIHKEVPAGGIQDAGNNMKQWNLDEVFILFSIIIVAMSMESSSMVEEEHYIWHFLTATVILLFLRKSIASSKLNKPHDHLNSVKGRNISGCYQMSSLLLILFCGRILRGWHQGGVNWTYLPDISKWLEQAGNHYITMIRLASCVMIIILAALVLYFMQSKMKVVMVTGLSLLVSGFLILQHFLKHPELSAIDNKDTTLSIQIFDAIHGTISVIVALILPWTIPIKTPEMSSRWNSYVRDAAPVETQSMATNLVLKDCLYVVGCMYVTSWCLLQLLLQHPMNAMPVFLLYVQVVASMQTFSSWLHHNQWVEITLLYSMGMAGHFALGNSNTLATIDVAGAFIGISSHSTFLSGVQMFMITYASPMLFLLSMVMYISIKMSINLPVTKEGNSGEILKNLLVFPCLVPLSINSVLLTSYTIVLLMMRNHLFIWSVFSPKYLYVCAATACVYIGVFIVAATVSHTYVVLFHLRKSFRITSKENGTRD* 2130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0012 2129 PANTHER KINESIN-LIKE PROTEIN KLP-3 930 1185 - -
Amo05g0012 2129 PANTHER KINESIN-LIKE PROTEIN KIN-14A-RELATED 930 1185 IPR030109 GO:0008017|GO:0009904
Amo05g0012 2129 Pfam Kinesin motor domain 153 459 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo05g0012 2129 SUPERFAMILY Alkaline phosphatase-like 1295 1506 IPR017850 -
Amo05g0012 2129 ProSitePatterns Kinesin motor domain signature. 360 371 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo05g0012 2129 PANTHER KINESIN-LIKE PROTEIN KIN-14A-RELATED 2 903 IPR030109 GO:0008017|GO:0009904
Amo05g0012 2129 Pfam GPI ethanolamine phosphate transferase membrane region 1670 2102 IPR045687 -
Amo05g0012 2129 MobiDBLite consensus disorder prediction 653 689 - -
Amo05g0012 2129 PRINTS Kinesin heavy chain signature 218 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo05g0012 2129 PRINTS Kinesin heavy chain signature 410 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo05g0012 2129 PRINTS Kinesin heavy chain signature 361 379 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo05g0012 2129 SMART kinesin_4 144 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo05g0012 2129 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 903 - -
Amo05g0012 2129 Coils Coil 476 510 - -
Amo05g0012 2129 MobiDBLite consensus disorder prediction 649 692 - -
Amo05g0012 2129 Pfam Type I phosphodiesterase / nucleotide pyrophosphatase 1348 1445 IPR002591 -
Amo05g0012 2129 Gene3D Kinesin motor domain 90 460 IPR036961 -
Amo05g0012 2129 ProSiteProfiles Kinesin motor domain profile. 146 460 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo05g0012 2129 Gene3D Alkaline Phosphatase, subunit A 1358 1526 IPR017850 -
Amo05g0012 2129 Coils Coil 546 566 - -
Amo05g0012 2129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 500 IPR027417 -
Amo05g0012 2129 MobiDBLite consensus disorder prediction 1 49 - -
Amo05g0012 2129 Coils Coil 621 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0012 Amo-Chr5 106834 132498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0012 133 461 Calmodulin-binding Proteins AT5G65930 36.812 1.10e-48 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0012 - - gmx:100810330 1567.75