Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0006 ATGAAATGGTTAATTTTTAATTTTTATGTGAATTTTTGTTGGATTTGCATCTATGTTCTTGCCCCAACCTTCTTCCATTTTTACCCTAAAGCACATTCATTCTCTCTCTTCCTACATAAAGCTCTCTCCTTTCATCACTCTCACACTCACTCCATTCTCCATTCTCCACTCTCACACCTCCATTCTCAGCCATTCTCATGTGGGTCATTCATTTTCACCACAAAACACCCTCTGAAGTTTTGTTTTTTAATCCCAGCTTCTTCAAGTTTTGATGAGGTTCAATTGGGTTCGGTTTTTCTCTGTTTCATAGCATTTTTTTACCTTTTTGTTGTTGTTAAGGAAGAAGGGTCAATGGCTGAGAACTCAAACCTTCTACTATGTTCCGAAAACAACATCACTTGTTTTGATGATGATGACGATGATGGTGATGATTTGGAGTGTAATGTTGCTGCTGCTGATGGGTCTGGAATCTTACCATGTTGGGACCACAGCAACAACCTTAACTCCGACCAACCATGTCCGAGTTCAGAAAACCGTGGATCGGGTCCATTGTATTGTTTTGATGTTCTGAGTGAAGAAACAATGAAAGACATGGTGGAAAGGGAAAAAGAGCATTTACCAAAGGAGGATTATCTTAAGAGGCTACGTAGTGGGGACTTGGACCTCAGTGGTAGGAGAGAGACCATTGATTGGATTTGGAAGGCTCATTCCTATTATGGTTTTGGACCCTTGACCTTTTGCCTATCTGTGAACTACTTGGATCGCTTCTTATCCTTGTATGAATTGCCGAGAGGTAAAAGTTGGACTATGCAATTGTTAGCTGTAGCTTGCTTGTCGATTGGGGCGAAAATGGAGGAGGTTAAAGTGCCGCAATCCGTCGACTTACAGGTTGGAGAACCAAAGTTTGTATTTGAAGCTAAAACCATTCAAAGAATGGAACTATTGGTGTTAAGCACATTGAGATGGAAAATGCAAGCTTTAACTCCTTGTTCCTTCATAGATTATTTCCTAAAGAAGATCACTTTCAAGCAACATTTGGCGAATCGGACCATTTCGAGATCAATACAGCTCACCCTTAGCATAATTAGAGGGATTGACTTCTTGGAGTTCAGGCCTTCTGAAATCGCAGCGGCTGTGGCGATTTCTGTTTCAAAGGAGTTGCAACAAGCGAAAGATATCGATAAGGCCTTAGCTAGCTTCTTCATTGCAGAGAAGGAGAAAGTTCTAAAGTGTGTTGAATTGATTAGAGACTTGGCATTGATGAATGTTTCTAATTTTGGTGCAAAACATCATGTGCCATTTGTGCCTCAAAGCCCAATTGGGGTGCTTGATGGTGGTGGATGCTTGAGCTATAAGAGTGATGAATTAACAACACTTGGTTCCTCATGCCCAAATAGTCCAAAAACTAAAAGGTTCAAATCAGAAGGAGGACCTTGTTGTAATGGGACCTCAGATTCATGA 1461 0.4079 MKWLIFNFYVNFCWICIYVLAPTFFHFYPKAHSFSLFLHKALSFHHSHTHSILHSPLSHLHSQPFSCGSFIFTTKHPLKFCFLIPASSSFDEVQLGSVFLCFIAFFYLFVVVKEEGSMAENSNLLLCSENNITCFDDDDDDGDDLECNVAAADGSGILPCWDHSNNLNSDQPCPSSENRGSGPLYCFDVLSEETMKDMVEREKEHLPKEDYLKRLRSGDLDLSGRRETIDWIWKAHSYYGFGPLTFCLSVNYLDRFLSLYELPRGKSWTMQLLAVACLSIGAKMEEVKVPQSVDLQVGEPKFVFEAKTIQRMELLVLSTLRWKMQALTPCSFIDYFLKKITFKQHLANRTISRSIQLTLSIIRGIDFLEFRPSEIAAAVAISVSKELQQAKDIDKALASFFIAEKEKVLKCVELIRDLALMNVSNFGAKHHVPFVPQSPIGVLDGGGCLSYKSDELTTLGSSCPNSPKTKRFKSEGGPCCNGTSDS* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0006 486 Pfam Cyclin, N-terminal domain 195 324 IPR006671 -
Amo05g0006 486 Gene3D - 196 414 - -
Amo05g0006 486 CDD CYCLIN 224 317 IPR013763 -
Amo05g0006 486 PANTHER CYCLINS 118 473 IPR039361 -
Amo05g0006 486 SUPERFAMILY Cyclin-like 184 324 IPR036915 -
Amo05g0006 486 SMART Cyclin_C_2 327 455 IPR004367 -
Amo05g0006 486 SMART cyclin_7 230 318 IPR013763 -
Amo05g0006 486 PANTHER CYCLIN-D4-1-LIKE 118 473 - -
Amo05g0006 486 Pfam Cyclin, C-terminal domain 328 421 IPR004367 -
Amo05g0006 486 MobiDBLite consensus disorder prediction 465 486 - -
Amo05g0006 486 Gene3D - 208 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0006 Amo-Chr5 58741 61689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0006 191 390 Core Cell Cycle Gene Families AT5G65420 63.366 1.31e-90 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g0006 K18810 - gmx:100794010 424.091