Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g3008 ATGGCGACTCCAGAAGAGGCAAAGCTCGAAACTTTCCTTCAGTGGCTACAGGCAAATGGGGTGGAGCTACGAGGCTGCAAGATCAAGTACTGTGATTCCAGAAAAGGGTTTGGCATATTTTCCGATAAAGATGTCTCTGATGGTGTTTTGTTGGTTGTTCCGCTTGACTTAGCAATTACTCCCATGAGGGTGATGCAAGATCCTCTTCTAGGGCCAGCATGTAGATCCATGTTTGAAGAAGGACATGTGGATGACAGGTTGCTAATGATGCTCTTGCTGACTGTGGAGCGATTGCGCAAGAATTCTCTGTGGAAACCGTACCTCGATATGCTCCCAACCACTTTTCACAATCCACTTTGGTTTAGCGATGACGAACTTCAAGCACTAAGAGGAACAACTTTATACCGTGCAACTGAGTTGCAGAAGAAAAGCCTGGTATCTTTATATGAAACTAAAGTGAAGGATTTGGTGAAGAAGCTTTTGACTCTTGATGGAGCTTCAGAGATTGAGGTGCGCTACGAAGATTTCCTTTGGGCCAATTCAGTATTCTGGAGCCGTGCTTTGAACATTCCGATGCCTCGTTCTTATGTATTTCCAGAAATGCAAGAAGCTCGAGAAAGTTGCATTCCAGAAGGTGATGGAAAAGGGAGTCAGGTTAAACAATCCGAAAATCTAACGAAGGAAATGATGTGTACCACGACTCAAGGAGACACTGTTTGGGTAGAGGGTCTTGTCCCTGGCATTGACTTTTGCAACCATGATCTGAAGCCGATAGCAACATGGGAAGTTGATGGAACTGGTTCAACAACAGGGGCTCCTTGCTGCATGTACCTTCAATCTGCTTCTCCAAGTCCCTTGCGGATTGATCAAGAAATTTCCATCAGTTATGGCAACAAAGGAAATGAGGTTCACTATCCAGCAGAAGCACTCAATACTATTTCTTTTTCGGAGTCCAAAAGCCAGCTGCTCGAAGTGCAGAAGGCTGAAATGAGATGTCTTTTACCTAAAGCTTTGCTGGAACAAGGATTTTTTCCATTAGGCACCCAAAATAAAGGAGAAAACAACAATGGCAAGGTTGATCAAGTCGCCAACTATAGTTGGAGTGGTCAGCGTAAGACGCCATCGTATGTAAACAAGCTGGTTTTTCCTGAAAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGATGAACTTTACAAGGTTTCCTCAATGCTTGAAGAGCTTGTAGGACCTGAAGGGGAGAGAGAACTATCTGATACAGATGTGCAAGCAGCAATATGGGAGGTTTGTGGTGATTCCGGAGCTTTCCAAATTCTTGTTGATCTTCTTCGTGTGAAGTTGATGGATCTTGAAGAGGGTTCTGGAACAGAAGAAAGTGACCTTGATTTGCTCAAGAAGGCTCTTATTATTGATAGCCACGAAAATAACAAACATCCAAGCAAAATGGAAAATGAGTCAGAAGAACAAGAACGCATTGTGATGAGTAGAAACAAGTGGTCTTCAATTGTATATAGGCGTGGCCAAAAGCAGCTAACAAGGTTATTCTTGAAAGAAGCAGAACATGCTCTTCAGTTATCACAAAATGAACAAGACTTTACTGTTCCTTAA 1614 0.4294 MATPEEAKLETFLQWLQANGVELRGCKIKYCDSRKGFGIFSDKDVSDGVLLVVPLDLAITPMRVMQDPLLGPACRSMFEEGHVDDRLLMMLLLTVERLRKNSLWKPYLDMLPTTFHNPLWFSDDELQALRGTTLYRATELQKKSLVSLYETKVKDLVKKLLTLDGASEIEVRYEDFLWANSVFWSRALNIPMPRSYVFPEMQEARESCIPEGDGKGSQVKQSENLTKEMMCTTTQGDTVWVEGLVPGIDFCNHDLKPIATWEVDGTGSTTGAPCCMYLQSASPSPLRIDQEISISYGNKGNEVHYPAEALNTISFSESKSQLLEVQKAEMRCLLPKALLEQGFFPLGTQNKGENNNGKVDQVANYSWSGQRKTPSYVNKLVFPEKFMTTLRTIAMQEDELYKVSSMLEELVGPEGERELSDTDVQAAIWEVCGDSGAFQILVDLLRVKLMDLEEGSGTEESDLDLLKKALIIDSHENNKHPSKMENESEEQERIVMSRNKWSSIVYRRGQKQLTRLFLKEAEHALQLSQNEQDFTVP* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g3008 537 SUPERFAMILY SET domain 8 302 IPR046341 -
Amo04g3008 537 Pfam SET domain 36 297 IPR001214 GO:0005515
Amo04g3008 537 Gene3D set domain protein methyltransferase, domain 1 5 305 - -
Amo04g3008 537 PANTHER SET DOMAIN-CONTAINING PROTEIN 3 532 - -
Amo04g3008 537 CDD SET_LSMT 32 305 - -
Amo04g3008 537 ProSiteProfiles SET domain profile. 26 297 IPR001214 GO:0005515
Amo04g3008 537 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 532 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo04g3008 SET 9.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g3008 - - gmx:100777394 861.292