Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2957 ATGACTCTGAGGGTTGCTAAGAGCATGGATCTCCAGTTAGATATAGAGACTGAAGCTACTCACCATGCAAATCTGCCTGTACTTCTCAAGTTCTATGATGTTGTTTATAAAACTAAGCCAGAGAAAGAGAGATTCATAGAGAACACAAAGGTGGAAGGAAAAACAATACTGAAAGGTGTTTCAGGCATTGTTCAACCAGGTGAAATTCTAGCCATGTTAGGCCCATCAGGGAGCGGCAAAACAACTCTCCTAACAGCATTAGGAGGCAGACTTGGAGGAAAACTCTCTGGAAACATAACTTACAATGGCAAAACTTTCTCGAATGCAATGAAGCGTCTTACCGGCTTTGTTACTCAAGATGATGTTCTGTATCCTCATCTAACTGTCACCGAGACTCTAATCTTCACCGCGCGTCTTAGATTGCCAAGTAGTAGGTTCACCAAAGAAGAAAAAATAATGCAAGCAAAAAATGTGATAGATCAACTAGGCTTAACCGAATGCAAAGATAGCATGATTGGAGGGCCATGTTTGAGAGGTGTTTCTGGGGGAGAGAGGAAAAGGGTTAGTATTGGTCAAGAAATGTTAATAAATCCAAGCTTGTTGCTTTTGGATGAACCAACCTCTGGCTTAGATTCGACGACGGCGCAAAAAATTGTATCAACTTTGTCTGAGCTAGCAAGTGATGGAGAGAAAACTATTGTGATGACAATACACCAACCTTCTAGTAGGATATACTACTTGTTTCACAAGGTCTTACTCTTATCAGAAGGGAACCTTATGTATTTTGGAATGGGTTCAGAAGCTGTTAAATACTTCTCAAGCGTTGACTATGCTCCTTCTATGGACATGAATCCTTCTGACTTCCTACTTGATCTTGCAAACGGTATATACACCGGTCAACCGAATGAGGACCATACCTTAAACAAGAAGAAACTGATTTCTTCCTACAAGGAACACTTTAGTGACACAATAGAACCAATGTTTCATGAAAAGTGTGACTTTGATAAAAATGAAGATAGATTTGAAGATGAAAAAAGCTTTGGGACTTGGCCTACCAGCTGGTGGCAGCAATTCTTTCTGCTGCTAAGAAGAGATGTCAAAGAGAGAAGACATGAATCATTCTCTTGCATTCTAATTTTTGAAGTTATTGCAGCTGCCATTATTACAGGACTAGTTTGGTACAAGTCTGATATTTCTCACTTGCAGGATCAGCTTGGACTTTTATACAACATGATTAACTTCTGGTTCGCCTTCCCTCTCTACCGAGCAATATTCACCTTTCCCCAAGAAAGACCAATGTTGGAGAAAGAAAGATCCTCCGGTATGTACAGACTCTCCTCATACTTAATGGCAAAGTCGGTGGCGGATCTTCCAATTGAGCTTGTCCTTCCAACTGCATACCTCATCATAACCTATTGGATGACAGGTCTGAAAGTGAATGCAGTTAACTTCTTGTGCACGCTATCTACCGTCTTACTCCACGTGTTAGTCGCACAAGGGGTCGGCCTTGCCATCGGCGCCATTGTGATGGATATGAAATCTGTGACCACATTGGCTGCAATAATCATGCTAATTTTCATGCTATCAGCTGGATACTTTGTTCAACATTTACCAAAATTTATGGCATGGTTGAAGTATATTTCCCCAAGTTACTACACATACCTGCTATTGATAGGATCTCAGTATAAATCTAGTGAGACATACCCATGCTCTAACAATAATGGTGAGTGTTCAGTTGCAGAATTTCCTATGATAAGGACACAAATGGTGCTTGATATGAAAGAGCAAGCCATGGCTGCATTGGCTCTAGTTATAATGCTTATAGGTTATAGAATTGTGGCTTATATTGCGCTATTGAGGATTGGAGTGACAAAGAGCAAGGCTTAA 1887 0.4059 MTLRVAKSMDLQLDIETEATHHANLPVLLKFYDVVYKTKPEKERFIENTKVEGKTILKGVSGIVQPGEILAMLGPSGSGKTTLLTALGGRLGGKLSGNITYNGKTFSNAMKRLTGFVTQDDVLYPHLTVTETLIFTARLRLPSSRFTKEEKIMQAKNVIDQLGLTECKDSMIGGPCLRGVSGGERKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQKIVSTLSELASDGEKTIVMTIHQPSSRIYYLFHKVLLLSEGNLMYFGMGSEAVKYFSSVDYAPSMDMNPSDFLLDLANGIYTGQPNEDHTLNKKKLISSYKEHFSDTIEPMFHEKCDFDKNEDRFEDEKSFGTWPTSWWQQFFLLLRRDVKERRHESFSCILIFEVIAAAIITGLVWYKSDISHLQDQLGLLYNMINFWFAFPLYRAIFTFPQERPMLEKERSSGMYRLSSYLMAKSVADLPIELVLPTAYLIITYWMTGLKVNAVNFLCTLSTVLLHVLVAQGVGLAIGAIVMDMKSVTTLAAIIMLIFMLSAGYFVQHLPKFMAWLKYISPSYYTYLLLIGSQYKSSETYPCSNNNGECSVAEFPMIRTQMVLDMKEQAMAALALVIMLIGYRIVAYIALLRIGVTKSKA* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2957 628 Pfam ABC-2 type transporter 238 333 IPR043926 GO:0140359
Amo04g2957 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 273 IPR027417 -
Amo04g2957 628 Pfam ABC transporter 57 208 IPR003439 GO:0005524
Amo04g2957 628 Gene3D - 48 276 IPR027417 -
Amo04g2957 628 SMART AAA_5 66 257 IPR003593 -
Amo04g2957 628 Pfam ABC-2 type transporter 356 561 IPR013525 GO:0016020|GO:0140359
Amo04g2957 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 281 IPR003439 GO:0005524
Amo04g2957 628 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 21 622 - -
Amo04g2957 628 CDD ABCG_EPDR 53 263 - -
Amo04g2957 628 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 21 622 - -
Amo04g2957 628 ProSitePatterns ABC transporters family signature. 180 194 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2957 Amo-Chr4 105043449 105047166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2957 27 356 Calmodulin-binding Proteins AT2G36910 23.907 1.22e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2957 K05681 - gmx:100816135 776.548