Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2953 ATGCCTCGTGGAACGCTCGAAGTCATTCTTGTGAGCGCAAAAGGTCTTAAGGATGCTGATTTTCTCAAAAAAATGGATCCTTATGTAATTCTCACTTATCGAGCACAGGAGAATAGAAGCAGTGTGGCAAGAGGTGGAGGATCTAACCCTCGTTGGAATGAGAGCTTTCTTTTCACAGTTTCTGATAATGTTGCTGAACTTAATCTGAGGATTATGGACAAAGATACTTTTACTCGGGATGATTTTCTTGGTGAGGCAAGAATTCCATTAGAACCAGTTTTTGCTGCGGGTAGCATTCAGGAAACTTCTTACAATGTTGTTAAGAACCAGAATTATTGTGGGGAGATTAAGGTGGCTCTCACTTTTAAGCCT 372 0.4086 MPRGTLEVILVSAKGLKDADFLKKMDPYVILTYRAQENRSSVARGGGSNPRWNESFLFTVSDNVAELNLRIMDKDTFTRDDFLGEARIPLEPVFAAGSIQETSYNVVKNQNYCGEIKVALTFKP 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2953 124 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Amo04g2953 124 PANTHER C2 DOMAIN-CONTAINING 1 124 - -
Amo04g2953 124 Pfam C2 domain 4 104 IPR000008 -
Amo04g2953 124 SMART C2_3c 5 102 IPR000008 -
Amo04g2953 124 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 124 IPR035892 -
Amo04g2953 124 PANTHER ELICITOR-RESPONSIVE-LIKE PROTEIN 1 124 - -
Amo04g2953 124 Gene3D C2 domain 2 124 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2953 Amo-Chr4 104999476 105000551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2953 4 97 C2H2 Transcription Factor Family AT4G21160 34.043 2.13e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2953 - - ahf:112794411 236.498