Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2876 ATGGATCATGGGGACCAAATGGCATCTTACTATATGCAGCAGAGAGGAATACCTGGTTCTGGAGCACAGCCMGAGTTTTCGGCCGGAATCCGGTCGCTGTCTAGCCCCAACCTACCATTTCAATCCGGCATTGGCAGTGGTGGATCAATTGGATCCACTATACAGCTAGAATCTTCRGGGATTTCGACCCAYGGTGTCAATGTTGGTGCTCCTCCGGGGGTACCGCCTGGGGAACCTGTCAAAAGGAAGAGAGGAAGGCCAAGGAAATATGGGACTGATGGAACTGTGTTGGCTCTTACACCAACTTCGTCGAGTCATCCCGGAGCCATGACAACACCAGGCCAGAAACGGGGCCGSGGACGGCCCCCTGGGACTGGGAAGAAACAGCAATTGGCATCACTTGCTGCCTTAGGTGATTTGATCATGTAA 429 0.5268 MDHGDQMASYYMQQRGIPGSGAQPEFSAGIRSLSSPNLPFQSGIGSGGSIGSTIQLESSGISTHGVNVGAPPGVPPGEPVKRKRGRPRKYGTDGTVLALTPTSSSHPGAMTTPGQKRGRGRPPGTGKKQQLASLAALGDLIM* 143
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2876 142 MobiDBLite consensus disorder prediction 62 142 - -
Amo04g2876 142 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 11 6 135 - -
Amo04g2876 142 SMART AT_hook_2 81 93 IPR017956 GO:0003677
Amo04g2876 142 SMART AT_hook_2 116 128 IPR017956 GO:0003677
Amo04g2876 142 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 6 135 IPR039605 GO:0003680
Amo04g2876 142 MobiDBLite consensus disorder prediction 96 111 - -
Amo04g2876 142 Pfam AT hook motif 116 127 IPR017956 GO:0003677
Amo04g2876 142 Pfam AT hook motif 81 92 IPR017956 GO:0003677
Amo04g2876 142 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo04g2876 Amo-Chr4 103928936 103931183 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2876 1 137 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 40.244 3.39e-14 65.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2876 - - gmx:100814615 169.088