Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo04g2876 | ATGGATCATGGGGACCAAATGGCATCTTACTATATGCAGCAGAGAGGAATACCTGGTTCTGGAGCACAGCCMGAGTTTTCGGCCGGAATCCGGTCGCTGTCTAGCCCCAACCTACCATTTCAATCCGGCATTGGCAGTGGTGGATCAATTGGATCCACTATACAGCTAGAATCTTCRGGGATTTCGACCCAYGGTGTCAATGTTGGTGCTCCTCCGGGGGTACCGCCTGGGGAACCTGTCAAAAGGAAGAGAGGAAGGCCAAGGAAATATGGGACTGATGGAACTGTGTTGGCTCTTACACCAACTTCGTCGAGTCATCCCGGAGCCATGACAACACCAGGCCAGAAACGGGGCCGSGGACGGCCCCCTGGGACTGGGAAGAAACAGCAATTGGCATCACTTGCTGCCTTAGGTGATTTGATCATGTAA | 429 | 0.5268 | MDHGDQMASYYMQQRGIPGSGAQPEFSAGIRSLSSPNLPFQSGIGSGGSIGSTIQLESSGISTHGVNVGAPPGVPPGEPVKRKRGRPRKYGTDGTVLALTPTSSSHPGAMTTPGQKRGRGRPPGTGKKQQLASLAALGDLIM* | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo04g2876 | 142 | MobiDBLite | consensus disorder prediction | 62 | 142 | - | - | |
Amo04g2876 | 142 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 11 | 6 | 135 | - | - | |
Amo04g2876 | 142 | SMART | AT_hook_2 | 81 | 93 | IPR017956 | GO:0003677 | |
Amo04g2876 | 142 | SMART | AT_hook_2 | 116 | 128 | IPR017956 | GO:0003677 | |
Amo04g2876 | 142 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 6 | 135 | IPR039605 | GO:0003680 | |
Amo04g2876 | 142 | MobiDBLite | consensus disorder prediction | 96 | 111 | - | - | |
Amo04g2876 | 142 | Pfam | AT hook motif | 116 | 127 | IPR017956 | GO:0003677 | |
Amo04g2876 | 142 | Pfam | AT hook motif | 81 | 92 | IPR017956 | GO:0003677 | |
Amo04g2876 | 142 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo04g2876 | Amo-Chr4 | 103928936 | 103931183 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo04g2876 | 1 | 137 | AT-hook Motif Nuclear Localized (AHL) Family | AT2G45850 | 40.244 | 3.39e-14 | 65.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo04g2876 | - | - | gmx:100814615 | 169.088 |