Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2871 ATGGGGATTCAGTTCTCCAGCCTCGTGCCGTGCTGCGTATATTCACAAGTTAAGGCATCTGTTATTGAAGTTCCGCATACTGGAAATGAAGATAGAAGTGAAGCCGATAATGGGCCTGCATTTCGCGAATTTACATTTGAGCAACTTAAGAATGCAACATCCGGTTTCTCTGTTCAGAATATAGTATCTGAACATGGAGAGAAGGCTCCAAATGTTGTGTATAAAGGGAAGTTGGAGAATCAAATGAGGATTGCTGTTAAGAGGTTCAATAGGAATGCTTGGCCCGATTCTCGGCAGTTTTTGGAGGAAGCTAGATCTGTTGGCCAGCTTCGTCACCAAAGATTGGCGAATTTGCTTGGTTGTTGTTGTGAAGGCGAAGAGAGGTTGCTTGTGGCCGAATACATGCCCAATGAAACACTCGCGAAACACCTTTTCCATTGGGAAACTCAACCGATGAAATGGCCAATGCGACTGAGAGTTGTTCTACATCTTGCAGAAGCTCTGGAATACTGCACGAGCAAAGGACGTGCGCTCTATCATGACCTTAATGCATATAGAGTTCTATTTGACGAGGATGGTAATCCTAGGCTTTCAACTTTTGGCCTTATGAAGAATAGTAGGGATGGGAAAAGTTATAGTACAAATTTAGCATTTACCCCTCCTGAGTATCTCAGAACTGGTAGAGTAACACCAGAAAGTGTAATATATAGCTTTGGAACTCTTTTGCTTGACATTCTCAGTGGGAAGCATATCCCTCCAAGTCATGCTCTTGATTTGATTCGAGACAGAAATCTTCAGATGCTGACGGATTCTTGCTTGGAAGGACAGTTTTCTGATGATGATGGAACCGAGTTGGTGCGCTGGGCATCTCGATGTTTACAGTACGAACCAAGAGAGAGGCCTAATCCGAAGTCATTAGTGGCTGCTTTGGCCCCTCTTCAGAAAGAGACAGAGGTTCCTTCACATGAATTGATGGGTATCCCGCATGGTTCTACTTTAGCTTCATTGTCTCCGCTCGGTGAAGCTTGTTCAAGAAAGGACCTGACTGCCATTCATGAAGTTTTGGAAAAACTTGGCTATAAAGATGATGAGGGAATTGCAAATGAGGTTCTCTATCTAAATTTGCTATATGCCTCTAAAATTGTTTTGGAGAAAGTTTAG 1161 0.4315 MGIQFSSLVPCCVYSQVKASVIEVPHTGNEDRSEADNGPAFREFTFEQLKNATSGFSVQNIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDSRQFLEEARSVGQLRHQRLANLLGCCCEGEERLLVAEYMPNETLAKHLFHWETQPMKWPMRLRVVLHLAEALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDILSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRWASRCLQYEPRERPNPKSLVAALAPLQKETEVPSHELMGIPHGSTLASLSPLGEACSRKDLTAIHEVLEKLGYKDDEGIANEVLYLNLLYASKIVLEKV* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2871 386 PANTHER LRR RECEPTOR-LIKE KINASE 1 372 - -
Amo04g2871 386 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 372 IPR045845 GO:0004672|GO:0009742
Amo04g2871 386 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Amo04g2871 386 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Amo04g2871 386 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2871 386 SUPERFAMILY Protein kinase-like (PK-like) 38 318 IPR011009 -
Amo04g2871 386 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2871 Amo-Chr4 103814761 103820523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2871 29 313 Glycoside Hydrolase AT3G07070 33.546 2.01e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Amo04g2871 PK_Tyr_Ser-Thr 2.9e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2871 K14500 - gmx:100781311 680.633