Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2855 ATGGCAACTGATATGCAGAGGCTTATTGGAACCAGCGAAGATGATGATGAAGAAATAGAGATGGATGTGAAAGAAGAGGATGATGAGGATGGAGATGAAGAGGAAAATGGAGGTGATCATGGAAATGCTTCGGAGATGGTAGGGATTGATGGTGGGAATGGTTTAGTGACTGCTGGTGGTGACAACAGTTTTCAACAGCAACAGCAGTTTCAAGAACAAGTTGGAACCCCAGGTGGATCTGCTCGAAGATGTAGACCACTAGAAGAGAAAGAACGGACAAAGCTAAGAGAGAGGCGCCGGAGGGCTATCACTGCTAAGATCTTGGCAGGGCTTCGCAGGCATGGCAACTACAATCTTAGAGTTAGAGCAGACATAAATGATGTTATTGCTGCTTTAGCAAGGGAAGCTGGGTGGGTGGTTCTTCCTGATGGCACTACTTTTCCTCCAAGATCCCAGGTGAGACCTGAACTAGACTTTTTTATTCTGAAGATATCCTGGAGTTTGATTTGGTGTATATTTGTGTGGTTTCCATGA 534 0.4513 MATDMQRLIGTSEDDDEEIEMDVKEEDDEDGDEEENGGDHGNASEMVGIDGGNGLVTAGGDNSFQQQQQFQEQVGTPGGSARRCRPLEEKERTKLRERRRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPPRSQVRPELDFFILKISWSLIWCIFVWFP* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2855 177 MobiDBLite consensus disorder prediction 58 76 - -
Amo04g2855 177 Pfam BES1/BZR1 plant transcription factor, N-terminal 81 149 IPR008540 -
Amo04g2855 177 PANTHER PROTEIN BZR1 HOMOLOG 3-LIKE 75 147 - -
Amo04g2855 177 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 75 147 IPR033264 GO:0003700|GO:0006351|GO:0009742
Amo04g2855 177 MobiDBLite consensus disorder prediction 11 36 - -
Amo04g2855 177 MobiDBLite consensus disorder prediction 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2855 Amo-Chr4 103690614 103692129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2855 1 152 Glycoside Hydrolase AT2G45880 63.636 1.74e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Amo04g2855 BES1_N 2.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2855 K01177 - gmx:100805560 188.348