Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2850 ATGTCTCCTTTTGCTAGAAGTGTTCTCTTGACATGGCTGCTGCTCACTATTGTGCTACCATCATATGCATTTAAATTTAGATTGCCTTTCTATAGCAAAACACATGTGAGTCTCACAAACTCTTTGGGTGGAAATTTAGACCTAACGCTTCATTGCAAATCCAAAGATGATGATCTTGGTATCCACCTTCTCWATCCTGGAGAAAGCTAYGAGTTTTCTTTCGGTACYAGTTTTATTTCTGAAACACTTTTCTTTTGTAGATTTTYATGGCAAAATGAATGCCACTATTTTGATGTTTGGATTTCTACAACAATGTTCAATTGTAGCTTTGCATGGCAAGGTGCATGCCATATGTTTGATGCATACAACAAAACAAGAGATCTTCAAAATTGCTACTCGAATTGCAATTATAATGTTAAGCAATCTGGACCATGCAGGGTTTATTCTTCAAAGAATATTAAGTGCTTTTCATGGAATAGTCAGAACTATTGTGCGGAATAA 501 0.3553 MSPFARSVLLTWLLLTIVLPSYAFKFRLPFYSKTHVSLTNSLGGNLDLTLHCKSKDDDLGIHLLXPGESYEFSFGTSFISETLFFCRFXWQNECHYFDVWISTTMFNCSFAWQGACHMFDAYNKTRDLQNCYSNCNYNVKQSGPCRVYSSKNIKCFSWNSQNYCAE* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2850 166 Pfam Plant self-incompatibility protein S1 99 158 IPR010264 -
Amo04g2850 166 Pfam Plant self-incompatibility protein S1 35 100 IPR010264 -
Amo04g2850 166 PANTHER - 9 102 IPR010264 -
Amo04g2850 166 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 101 152 - -
Amo04g2850 166 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 9 102 - -
Amo04g2850 166 PANTHER - 101 152 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2850 Amo-Chr4 103584759 103587241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2850 33 161 Carbohydrate Esterase AT3G16970 33.333 5.28e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2850 - - aprc:113862484 122.864