Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2822 ATGGCGAAAAGACCCCCGAGATTAACTGTGCAGTATGAGAAAGATCAATCTGGTTGTATGTGGGGTTTTATTAGTATGTTCGATTTTCGCCATGGTCGCTCTACTCGTAGGATGATTGCAGATGCGAAACGCAGCAGCCAGCATGCTGTAGGTGCTGTACCTGTACCTACCAAGAACAAGTTTGAGACATTAAGCGATTTGGACGAAGAATATCAAGGCCATCTTGAAAGAGGAGAGAGTATGAGACTGATTGAGATAACTGATCCGGATAAGCCTAGTATGAAGAAACTCATAGAAGAAGAGATGTTCATCGAGAAGGATGCGGTGAAGGATCTAGGTCATGCTGATCAAGTAGAGTCAAAGAAATCCAGAGTAGCAAGTGAAGTTTCCCCAAAGACAGATTCCAAAAGAAAAAAGAAATCTCGAAAGAAAAGCCGTGATATGGACACCCATGAGTTGAGTTCGGATGCAATGCTGAAGTCTGAATTCCTGCATAACCCGCATTCAAGGCAACAGTCAAAAGATAATCTTGATTTAGACAAGATAATGGAAGACTTTTGTCACGTTAAGGGTGGTTGTTCTGTGATGCATGACAATGACAGCGAAGTTAATTCACAATCAAACCAAAATTATGGTGTTTCTGAAAACCTTGCAAGGGATGCAATCCATGAGTTTGTGAATCAAATGATAGCAAATGGGAAAGATCAGGCAGAAGATGGAAAATCCAATTGCTCAAATGAACTCATGGAAGCACTTCAGGTTATAAGCTCGGATAAGGAATTGTTTGTTAGACTTCTACAAGAATCAGATTCAATTTTATTGAAACATGTTCAGGAGTTGGGGAATTCTCATGCAATAAATGACAATGAACACAGCTCAGTTATTGGCTCCAAGTTCTCTGTAGAAGAAGACCTTGACAATCCGAAACAAGAAAAGGAAACTTTCAACCGTAAACATCGTAACTTTTTCAGGAAAAGGTCAAAGTCTCAATCAGAATGTCCTACAAACGAGAATGGGAAAACAGAGTTTACAAATAGAATAGTCATTCTGAAGCCTGCACTAACAAGTTCACGAAGTTCTGGAAGCATCCTTGCCTCTTCACTTGATTCTCATGATGTTGTCCATCACAAAGGTCGTTTTGTGAAAGTTAGTTCACATTTTTCTCTTACAGAGATAAAAAGGAAATTGAAACATGCCATGGGAAGGGAGAAACATGGAAACGCCGAAGGGATCTCAAGAAAGCTTCCGGATAAATGTCAAAATAAGGGGCCAGGGAGCAAAACCATTGGGAAAGACAATAATGTTGGAATGAGGTCTCCAACTAAAGACCATTTCTTCATGGAAAAGATTGCAAGACCTATGTTTGATGTTATGAATGGAAACAAGACCGGTGCTTCAAAACACTCCGAATTTAGTGTGGAACATGAAAATGACAGTTCCAAACAAAGGGTTTCTAACTTATATATTGAGGCTAGAAAACATCTGTGTGAGATGCTAGACAGTGGAGATGAGAACACAAACATATCAGGTAGGCAGAGCCCCAAAACACTTGGTCGAATACTATCTATTCCTGAGTACAACTTTTCTCCCCTTGGCAGTCCCGGACGGGATTTGGAACATCATTTTGTGACCACAAAGACAAGATTTTCTGTGTCAGATAGACCTTCAGAGGTTAATCAGGATAACTTGTCACCCAAGCAAGCAACCTTTGTCGATCCTCTGGATCAGGCAATGAGCAATTCAGAAAAGCAGTCCAGCATTTGTGAAGAAATCTCTAATAATGAAGTACAACAAACTAATTCACAGTCAAACTTGGCACATGATGTTGGTTGTGTTGATACAGAAGAAACCTGTTCTCCTGTTATTGATGAGACAGTTACTGAAGTTAACGTAGAATCTGAAAAAGAGACAGACATTTTGCAATCATCCCCGATTCCAGTGGGATTCGTCATGGAAAAAGAACAATATTGTGTGATGTTAGAAATTTCTGATAGTACACAGGGTTCTTCATGTTTGAATCAGGTTGTTACAGAAGATGTCCAACCATCATCTCCACCATTATCCCCTTCTCACTCGTCTGTCGCAAAGAAAATTGAAGAGATAGAAAGCGTTACAGATGTTTCCGGCCGACCAAGTCCCGTATCTGTTCTTGATACTCCATTCTTGGATGAGGATTCAAGTCCTGGATACTCGAGATGTCAAGCTGTTAAATTGCCAGTACGACCGCTGCAATTTGATGAATGTGACTCTTCGCCTGTTGATCAACTTGAAAGAGGAAAATATTGTTTCGAAGAGAATGAATTGATATATGATTACATTAAAGCTGTCTTACAAGCATCAAGCTTGACTCCGGATCAACTGTTGGTGAAATGCCTTTCATCAGACGAGATACTCGATCCTTCCTTGTTTGCTCAGATAGAGTTCTTCCCCAATCCACTTTGCCATGACCAGAAGCTCCTATTCGACTGTATCGAGGAAATTCTCGTGGAGGTTTGTTGGTATTACTTTGGAGTCTCACCTTATGTATCATTTGTAAATCCTAGCATAAGGCCAACCCCAAATATGAAAAGGGTTACTCTCAAAGTCTTTGAAGGAGTGTGCTGGCATATCCTTCCCCTGCCCCCACCACGTACCTTGGAACAAATCGTTAGAAAAGACCTGGCGGGGAGTGAAACGTGGATGGATCTTCGACCTGATGCCGAAACTGTTGGCTTCGAAATGGGTGAGGTCATTCTTGCTGAACTGATGGAAGATACAATATTGAGCTTTATAAGTGAAATCCCTGAAAGTGAATGTTCTCAGCTTCAACTTGAGGCTGATAACAATGAGAGCACCATCAACTTGTAA 2847 0.4081 MAKRPPRLTVQYEKDQSGCMWGFISMFDFRHGRSTRRMIADAKRSSQHAVGAVPVPTKNKFETLSDLDEEYQGHLERGESMRLIEITDPDKPSMKKLIEEEMFIEKDAVKDLGHADQVESKKSRVASEVSPKTDSKRKKKSRKKSRDMDTHELSSDAMLKSEFLHNPHSRQQSKDNLDLDKIMEDFCHVKGGCSVMHDNDSEVNSQSNQNYGVSENLARDAIHEFVNQMIANGKDQAEDGKSNCSNELMEALQVISSDKELFVRLLQESDSILLKHVQELGNSHAINDNEHSSVIGSKFSVEEDLDNPKQEKETFNRKHRNFFRKRSKSQSECPTNENGKTEFTNRIVILKPALTSSRSSGSILASSLDSHDVVHHKGRFVKVSSHFSLTEIKRKLKHAMGREKHGNAEGISRKLPDKCQNKGPGSKTIGKDNNVGMRSPTKDHFFMEKIARPMFDVMNGNKTGASKHSEFSVEHENDSSKQRVSNLYIEARKHLCEMLDSGDENTNISGRQSPKTLGRILSIPEYNFSPLGSPGRDLEHHFVTTKTRFSVSDRPSEVNQDNLSPKQATFVDPLDQAMSNSEKQSSICEEISNNEVQQTNSQSNLAHDVGCVDTEETCSPVIDETVTEVNVESEKETDILQSSPIPVGFVMEKEQYCVMLEISDSTQGSSCLNQVVTEDVQPSSPPLSPSHSSVAKKIEEIESVTDVSGRPSPVSVLDTPFLDEDSSPGYSRCQAVKLPVRPLQFDECDSSPVDQLERGKYCFEENELIYDYIKAVLQASSLTPDQLLVKCLSSDEILDPSLFAQIEFFPNPLCHDQKLLFDCIEEILVEVCWYYFGVSPYVSFVNPSIRPTPNMKRVTLKVFEGVCWHILPLPPPRTLEQIVRKDLAGSETWMDLRPDAETVGFEMGEVILAELMEDTILSFISEIPESECSQLQLEADNNESTINL* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2822 948 MobiDBLite consensus disorder prediction 398 440 - -
Amo04g2822 948 MobiDBLite consensus disorder prediction 114 157 - -
Amo04g2822 948 PANTHER (, RELATED) 1 936 - -
Amo04g2822 948 MobiDBLite consensus disorder prediction 114 135 - -
Amo04g2822 948 Pfam Protein of unknown function (DUF3741) 227 271 IPR022212 -
Amo04g2822 948 MobiDBLite consensus disorder prediction 398 416 - -
Amo04g2822 948 Pfam Domain of unknown function (DUF4378) 771 918 IPR025486 -
Amo04g2822 948 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 936 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2822 Amo-Chr4 102805593 102809624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2822 1 906 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 32.826 3.69e-102 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2822 - - aip:107635037 1853.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g2822 04 102805593 102809624 Amo02g0147 02 1811337 1816871 PCT
Amo02g0147 02 1811337 1816871 Amo04g2822 04 102805593 102809624 PCT