Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2808 ATGGAGTTGCAGGCTGATATATTGTTGGATGTTTGCAGCGAAGAAGAGGCGGGAGATAGTATCGAGAGTGTGTGTGACTTACTAGATGGGAGAAAGTTGTGTAGAACTAATAGAGTTAGGTGCTTGAATCCAGAGCTCAGTGGTTCCAAGAAAATTGTTGATTTGAACTCACTGGACCGGAAGACAAATGTGGCTAGTGTTGGAAACTTATGCAGCCGTAATTATGCAATGGATAGACTCAACAATTTGAATGGAAGTAAAACATCAGTAGCGGATATATCTGATGCAGTAAACAGCATGACTGGAGTTTCGGATGGTGGCAAGAGGTGTGATAGTGGCGATGAAGATAGTGTTAATAAGGGGAGCTCTGGTCGAAAGAGGAAGAGAGAGTCTATGTCAGAAATGCTGCACTGGATTCTTGATAGGGCTGAGAATCCTTGTGATCCTGCTATGGGTTCAATGCCCGAAAAGTCAAAGTGGAAGTCATATGGTAGTGAAGAGATCTGGAAGCAGGCTTTGTTGCTCCGGGAAGCTGTATATCTGAAAAGTGATCACCCTAGTTGGCAGGGTCAGAGGATGCATCCTTGCATGTATGATGATCAGGTTGGGGCAAACTACAATCTCAGGGAGAGATTAAAAACTGACAAGAAATCAACATCTGGTGATGGCTCTTCACATGCTGGAGGAACAGAGGGAGGTTCTGAGAGAAGTCCAACTCCTCATTCTAGTGCTGAGAAATGGTCACTTGATGTACCTGCCACCATGCCCATTCCTATTGGCCCGGCCCATCAAGCTGAAGTTCCTGAATGGACTGGCATGGCTGTTGAGAGTGATTCAAAATGGTTTGGAAACCAAATATGGCCAGCAGCAAAGGTGAATACCAATCTTATCGAAAGGGATCCCATCGGAGCTGGAAGAAAAGATTCATGTGGCTGCCAATTTCAAGGTTCTGTTGAGTGTATCCAATTCCATGTTGCTCAGAAAAGGGCTAAACTTAAGCTAGAATTGGGTGATGCATTTTACATGTGGAATTTACACAAGACAGGGGAAGATGTTAGGCGATTGTGGACCGAAGACGAAGAGAAGAAGTTTAAGGATGTGGTGAAAGCAAACCCTCTTTCACATGAGACATGTTTTTGGGAACAAATTTTCAAATCGTTTCCTACAAAGAGCAGGGAAGATTTAGTGAGTTACTACTTCAATGTCTTCCTCTTGCAGCGAAGGGGATACCAGAATAGGAATACTCCAAATGACATCAACAGCGACGATGATGAAGCAGAATATGGACCATTGAAGAATTCTTTCGGACATAACACAGATAACCCTCGCACTACCTTATTATCGCCTAAGAAGCCTAAGACAAAGGGAAGATAG 1374 0.4374 MELQADILLDVCSEEEAGDSIESVCDLLDGRKLCRTNRVRCLNPELSGSKKIVDLNSLDRKTNVASVGNLCSRNYAMDRLNNLNGSKTSVADISDAVNSMTGVSDGGKRCDSGDEDSVNKGSSGRKRKRESMSEMLHWILDRAENPCDPAMGSMPEKSKWKSYGSEEIWKQALLLREAVYLKSDHPSWQGQRMHPCMYDDQVGANYNLRERLKTDKKSTSGDGSSHAGGTEGGSERSPTPHSSAEKWSLDVPATMPIPIGPAHQAEVPEWTGMAVESDSKWFGNQIWPAAKVNTNLIERDPIGAGRKDSCGCQFQGSVECIQFHVAQKRAKLKLELGDAFYMWNLHKTGEDVRRLWTEDEEKKFKDVVKANPLSHETCFWEQIFKSFPTKSREDLVSYYFNVFLLQRRGYQNRNTPNDINSDDDEAEYGPLKNSFGHNTDNPRTTLLSPKKPKTKGR* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2808 457 MobiDBLite consensus disorder prediction 101 131 - -
Amo04g2808 457 MobiDBLite consensus disorder prediction 213 245 - -
Amo04g2808 457 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 94 455 - -
Amo04g2808 457 SMART sant 352 405 IPR001005 -
Amo04g2808 457 MobiDBLite consensus disorder prediction 221 244 - -
Amo04g2808 457 CDD SANT 356 403 IPR001005 -
Amo04g2808 457 MobiDBLite consensus disorder prediction 108 131 - -
Amo04g2808 457 Pfam Myb-like DNA-binding domain 355 402 IPR001005 -
Amo04g2808 457 MobiDBLite consensus disorder prediction 413 457 - -
Amo04g2808 457 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 94 455 - -
Amo04g2808 457 MobiDBLite consensus disorder prediction 434 448 - -
Amo04g2808 457 Gene3D - 356 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2808 Amo-Chr4 102461748 102465832 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo04g2808 Myb_DNA-binding 7.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2808 - - adu:107485800 940.643