LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo04g2786	ATGAGTTCACTCGAGGAACTATATCTAGACTGGTGCAGTAGTTTGAGAAGACTGCCAGATCTTTCTGGGGCTCCCAATCTTAAAATACTTGATCTTCGGGGATGCAAGGAGCTGGATTATATTCACCCGTCTCTCGCACACCACAAGAGGCTTGTTGAATTGAATTTAGGATATTGTGAGAGACTTGAAACACTTGGAGATAAATTGGAGATGAGTTCACTCGAGAGACTAGATCTATACTCCTGCAGTAGTTTGAGGAGACTGCCAGAATTTGGGGAATGCATGAAACAGTTATCGAAAATTATTCTGGCATATACAGACATAGAGTCCCTCACAGTCAGAGCTGATTATGATGATTCTGACGGCTCATCTAGAGAAGAGTCGACCCTTTCCTATGATATTGCCCACTTAGCATCGTTGACGGATTTGGATTTATCTGAGAACATGTTTTTAAGAGTTCCAATAAGTATCCATCAACTTACCAGACTTACACGTCTGCAGCTATGGGATTGCTCCGAATTGGAGGTTTTACCAGAGCTTCCATCAAGTCTAAGAGAATTAGGCGCAGGGGGTTGTTATTCACTAGCTGCATGGAATGTTGATGAAGTTATATCAAAGGCGTGTTGTGGCTTTGCAGAATCAGCTAGCCAAGATCGTGAAGACTTCTTGCAAATGTTGATCACAGGGGAGGAAATTCCAGCATGGTTTGAGCATCAGGAAGAAGATAACGGAGTATCAGTCTCATTCCCGCAGAATTGCCCTTCAATTGAAACCATCGCACTTGCTCTCTGTTTCGTAATTGAAATTGAAGAAGATATTTACCCAATAATGCCATCGGTGATCTGCAATGGTAAAGAATTCATCAACGCGAGTTTATACCCGTTCGATGGTTCAGATAATTTGTTCATTGTGTGCGTGAACGGTTACTATTGTAGTAAGCTGTTATGCCAACACAATCGCTTCCAAATTTTATCTCCAGATGATGACAATATTGATATCCGAGTAAAGAGATGTGGAGCACGTTGGGTGTTCAAGCAAGACATGCAAGATTTCAAGAAAAGAAAAGCAACTCTTGAACTGAACATGGACATTTCACATTCTTCAGCTTCTAGAAATAAGATGCTCGTGGTTGACTCTCCAATATATGAAGAAGAGATAGAGCCAGCCGCCACAGCGGAGGCCTCTATTTGCCATTTGGCATCTCGCAAAAGCTCTGACCCACCTCAACTCTTACCTCCCTTCCCTTTACAAGAGGTGCATGAAACTTATAACGTTGAAGGGTTAATGGAAAGTGAAGCCCTTAACCTCTTTTCTTTAGAAGCTTTTAACCTGCCAAAACCTTCAGAAGAGTTTTTGGATTTGTCCAAAGAAGTGGTTAAAGAAGTGGTTAAATACAGCGGTGGTCTCCCATTGGCACTTCAAGTATTGGGTTCTTATCTTAATGGTAGACCTATTGTGGTTTGGCACAGTGCTATTGAAAAAATAAAGCAGTTTTCACATTCTGAAATTATTGATGTATTGAAAATAAGCTTTGATGGTTTAGATGATATGGAAAAAAATATTTTTCTAGATATTGCTTGTTTCTTTAAAGGATATGAGAAAGGTAATGTAACAAGGATATTAGAAGGATGTGGTTATCAGGCTGAACTTGGTCTTCATATTTTGATTAACAGATCATTGGTCACTATAAATAAATATGATCAATTGGAGATGCATGATCTGCTTGAAGAAATGGGAAAACGAATTGTAATTCAAGAATCTCCAAATGATCCTAGTAAGCGTAGCAGATTGTGGTGTTACGAGGATCTTAATTCTGTACTTGCTCAAAAGAAGGGAACTGAAGCAATTCAAAGTATAGTGCTAAACTCAAGTTCTGAGAAGCATTTGAGGTTTGAAGCCTTCTCCAAACTAAAGCTGTCAAAACTTCTCATATTATGTGGTGTGGAAGTGGAAGTGGAACCTCCATCCGACCTTCCTTGCCTTCCTAGCACATTAAAAGTTCTGCACTGGTGGAGATGTCCTTTAAAAACACTACCCCTTGCAGAAACAGAACATGAATTTGCTGAAATTGAACTACGATTTAGCAGAATTGAGGAACTTTGGCTTGGGAAAAAGTTTCTTGGAAACCTGAAATACTTGAATTTGAGTCATTCATGGTATTTAAAGGAAACACCTGACTTTTCTGGGACTCCTATTCTTGAAACACTTATTCTTGGTGACTGTCCAGACCTCAGAGAGGTTCATCCATCCCTTGTACTACATGAGAATCTTGTTCTGTTGGACTTAAGCAAGTGTATAAGTCTTAAAACTTTTCCGGGAATACTGTATATGACATCCCTCAAGGAGTTAATTCTAAAGGACTGCCGGAGTTTTGAAAATAGACCAGAATTCGGGGAGTGCATGAAACAGTTATCCAGGCTATGTTTAGAGGGAACGGCTGTGAGGGAATTGCCTTCCTCACTTTTTCGCCTTCCCATCACTATCAATAAGAGAAAGTCTAGGGAGCCAGCACTTTTATTAAATTCTGGCCAGCACTTAGCCAGTAAAAGAAAAATAAGTAGTTCTCTATCATTAGATGAAATCTCGCACCATTAA	2595	0.3985	MSSLEELYLDWCSSLRRLPDLSGAPNLKILDLRGCKELDYIHPSLAHHKRLVELNLGYCERLETLGDKLEMSSLERLDLYSCSSLRRLPEFGECMKQLSKIILAYTDIESLTVRADYDDSDGSSREESTLSYDIAHLASLTDLDLSENMFLRVPISIHQLTRLTRLQLWDCSELEVLPELPSSLRELGAGGCYSLAAWNVDEVISKACCGFAESASQDREDFLQMLITGEEIPAWFEHQEEDNGVSVSFPQNCPSIETIALALCFVIEIEEDIYPIMPSVICNGKEFINASLYPFDGSDNLFIVCVNGYYCSKLLCQHNRFQILSPDDDNIDIRVKRCGARWVFKQDMQDFKKRKATLELNMDISHSSASRNKMLVVDSPIYEEEIEPAATAEASICHLASRKSSDPPQLLPPFPLQEVHETYNVEGLMESEALNLFSLEAFNLPKPSEEFLDLSKEVVKEVVKYSGGLPLALQVLGSYLNGRPIVVWHSAIEKIKQFSHSEIIDVLKISFDGLDDMEKNIFLDIACFFKGYEKGNVTRILEGCGYQAELGLHILINRSLVTINKYDQLEMHDLLEEMGKRIVIQESPNDPSKRSRLWCYEDLNSVLAQKKGTEAIQSIVLNSSSEKHLRFEAFSKLKLSKLLILCGVEVEVEPPSDLPCLPSTLKVLHWWRCPLKTLPLAETEHEFAEIELRFSRIEELWLGKKFLGNLKYLNLSHSWYLKETPDFSGTPILETLILGDCPDLREVHPSLVLHENLVLLDLSKCISLKTFPGILYMTSLKELILKDCRSFENRPEFGECMKQLSRLCLEGTAVRELPSSLFRLPITINKRKSREPALLLNSGQHLASKRKISSSLSLDEISHH*	865

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo04g2786	864	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	414	525	IPR027417	-
	Amo04g2786	864	Pfam	C-JID domain	228	348	IPR045344	-
	Amo04g2786	864	PRINTS	Disease resistance protein signature	466	480	-	-
	Amo04g2786	864	PRINTS	Disease resistance protein signature	775	791	-	-
	Amo04g2786	864	PANTHER	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	426	838	-	-
	Amo04g2786	864	PANTHER	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	127	196	-	-
	Amo04g2786	864	PANTHER	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	11	100	-	-
	Amo04g2786	864	Coils	Coil	680	700	-	-
	Amo04g2786	864	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	127	196	IPR044974	GO:0006952
	Amo04g2786	864	Pfam	NB-ARC domain	418	499	IPR002182	GO:0043531
	Amo04g2786	864	SUPERFAMILY	"Winged helix" DNA-binding domain	501	607	IPR036390	-
	Amo04g2786	864	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	11	100	IPR044974	GO:0006952
	Amo04g2786	864	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	426	838	IPR044974	GO:0006952
	Amo04g2786	864	SUPERFAMILY	L domain-like	619	825	-	-
	Amo04g2786	864	Gene3D	Ribonuclease Inhibitor	1	116	IPR032675	-
	Amo04g2786	864	SUPERFAMILY	L domain-like	2	265	-	-
	Amo04g2786	864	Gene3D	Ribonuclease Inhibitor	595	851	IPR032675	-
	Amo04g2786	864	Gene3D	-	427	515	IPR042197	-
	Amo04g2786	864	Gene3D	Ribonuclease Inhibitor	123	209	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo04g2786	Amo-Chr4	101574232	101578227	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo04g2786	454	824	WRKY Transcription Factor Family	AT4G12020	35.294	4.82e-49	187

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo04g2786	-		-	ahf:112797493	1662.89