Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2776 ATGCTTTCCTCTTCATTAACATGGTTTGTCACGGCGGTTGGACTACTGGTGGCGGTGGGGGGATGGAAGCTGCTGAACTGGCTCTGGCTGAGGCCTAAGAAGCTCGAGACCCTTCTCAGGGAGCAAGGCTTCCATGGCAACCTCTACACGCTCTTCGCCAACAACAACAACTCTTCTAATAACACGAAGCCAATGACTCTCTCTGATGACAAGGACATAACTCCACGTGTCTATTCTCAAGCCGATCATGCTATCATGAAATTTGGGAAGAATTCATTCTTTTGGGAAGGTCGGACACTCAAGGTGAATATCACAAACCCTGAGCATATTAAAGAAGTTCTTACCAATAACCGTTACTTCAAGAAAGAGAAGCCTAATATGATGCGTCTTGCCACGTTACTGGGATCTGGACTTCCGAACTATGAGGACCAACAATGGCACACACATCGAAGGATCATCAACCCTGCTTTCCATCTCGAAAAATTAAAAGTTCTAACATCAACAATGGTCCAATGCTGCGATGATGTGATTACTAAATGGGAGGAGATGCTGTCTTCAGAGGGTAAATGCGACATTGATGTATGGCCTTCCATCCAAAATTTGGCTTGCGATGTTATTTCCAGAACAGCCTTTGGAAGCAGTTACCAAGAAGGAAAAAGAATTTTTGAACTCCTTACCAAGCAAGCTAGACTTATAATGAGATTAAAATATGTTCACATCCCAGGATGGTGCATCAATCGAATCGTTAGCAAAAGAGAGAAAGCAATGAAGGATGATGAGGAGGTTAACAAGAGTGACTTATTAGGGATACTTTTGGAATCAAACAGCAAAGAAATAATAAAAGAACATGGAATGAGTAATCGAGAGATAGTGGAAGAATGCAACACATTTTACCTTGCAGGCCAAGAAACGACAGCTGATTTGATGGTATGGACAGTGGTGATGCTAAGTAGGTATCCGGAATGGCAAACGCGTGCGAGGGAGGAAGTATTCCAAGTCTTTGGCAACCGAAAGCCAGACAGTGATGGCCTGAATCGCCTTAAAACTGTGACAATTATCTTAAACGAGGTGTTAAGGCTATACCCGCCGGTCCTTTTTTTCAATCGAAGAGTCCAGAAAGATATAAAGATGCAAAATCTATCACTACCTGCCGGAGTTAAGGTTACATTACCAATACTTTTGATACACAAGGATCGTGAATTATGGGGTGATGATGCAACAGAGTTCAAACCAGAAAGATTTTCAGAAGGAATTGCTAAAGCGACTAAGGGTCGGCTCTCATATTTTCCATTTGGATGGGGGCCTAGAATATGCATTGGCCAAAACTTCTCCTTAATGGAAGCAAAGATATTCTTGACATTGCTTTTACAACGCTTCACATTTGAGCTCTCCCCTGCATATGCACATGCTCCAGTCATTTTCCTTACTCTTAAACCGATGCATGGGGCCCAAATCATCACCATAAATTGTAGTTTCAAGTGTGTACAAGCCTTTGGAATCTCTACTTTCATACCAAGTGGCGCCTCCAAATATAAGTAA 1539 0.425 MLSSSLTWFVTAVGLLVAVGGWKLLNWLWLRPKKLETLLREQGFHGNLYTLFANNNNSSNNTKPMTLSDDKDITPRVYSQADHAIMKFGKNSFFWEGRTLKVNITNPEHIKEVLTNNRYFKKEKPNMMRLATLLGSGLPNYEDQQWHTHRRIINPAFHLEKLKVLTSTMVQCCDDVITKWEEMLSSEGKCDIDVWPSIQNLACDVISRTAFGSSYQEGKRIFELLTKQARLIMRLKYVHIPGWCINRIVSKREKAMKDDEEVNKSDLLGILLESNSKEIIKEHGMSNREIVEECNTFYLAGQETTADLMVWTVVMLSRYPEWQTRAREEVFQVFGNRKPDSDGLNRLKTVTIILNEVLRLYPPVLFFNRRVQKDIKMQNLSLPAGVKVTLPILLIHKDRELWGDDATEFKPERFSEGIAKATKGRLSYFPFGWGPRICIGQNFSLMEAKIFLTLLLQRFTFELSPAYAHAPVIFLTLKPMHGAQIITINCSFKCVQAFGISTFIPSGASKYK* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2776 512 Pfam Cytochrome P450 87 228 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2776 512 Pfam Cytochrome P450 245 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2776 512 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2776 512 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2776 512 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2776 512 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2776 512 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 14 486 - -
Amo04g2776 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Amo04g2776 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 486 - -
Amo04g2776 512 PRINTS E-class P450 group IV signature 438 456 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2776 512 PRINTS E-class P450 group IV signature 291 317 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2776 512 PRINTS E-class P450 group IV signature 422 438 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2776 512 PRINTS E-class P450 group IV signature 347 363 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2776 512 Gene3D Cytochrome P450 78 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2776 512 SUPERFAMILY Cytochrome P450 84 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2776 Amo-Chr4 101321667 101323703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2776 22 486 Cytochrome P450 AT3G14690 47.262 9.10e-165 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2776 - K17873 gmx:100781923 580.096