Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2761 CCAATAATGTTGCCATTCTTCCCAAGGCTTAATCCCATGAAGCTCTTAGCAATGTGTTGCCTTCTTTTAATGAGTGTTACAACTTCCATGACTACCACTTCAGTTGCTATTCAAGGCAACGAAGAAGCGTATGCTTTGCTGGACTGGAAAGCCAGCTTTGAGAAGCAAAGCCAGGCTTTGCTCTCTTCTTGGAATGGTAGCGACCCCTGCCATTGGGTGGGAATAGCATGTGATCACTCCAAATCTGTGTCCTCGCTAAATTTTACCAAATTTGGCCTAAGAGGTACGCTTCAAACTCTCAATTTCTCGTCACTTCCCAACATCCATACAATAGCCATGAGTAACAACTCGTTTTATGGAACCATTCCCAAACAAATTGGTGTATTATCCAATCTGGACACTCTTGATGTCCACTACAATCAGTTCTCTGGTTTCATTCCCAAACAAATTGGTAGTTTGTCTAAACTCACCGTTCTTGATTTGGGTGCCAACAATTTCTTGGGCAACATTCCCCAAGAAACTAAGCATTTGAGCAACTTGAAGTATTTGTCATTTGCATACAATAATAATTTAAGGGGATCCATTCCTGCCGAGATTGGGATGTTGAGGAATCTAACACAGCTGCATTTTGAACATTGCAATCTCACAGGTTCTATCCCTACTACAATAGGCAACTTAACTAATTTGTCTGTACTCAATTTGAATATCAACCATTTAGATGGTCCCATTCCTCGAGAAATAGGCAAGTTAGTTAATGTGAAGTTTCTATGGCTTCAAACCAATGAACTTTCTGGTTCCATCCCTCGAGAAATTGGTCTCATGACAAATCTCTATCAGCTTGATTTTTCTGACAATAATCTCTCTGGTTGTATTCCTTCTACAATTGGAAATTTAAGCAATTTGGTATATCTATACCTTTATATCAATTCTCTCTCTGGTGCGATTCCTGATGAAATTGGAAACCTTTATTCTCTTTCTACGATCCAATTGTCATCCAATAACCTTTCAGGGACAATTCCACCTTCCACAAGTAGCTTGGTCAATTTAAACTCTATTCTTCTTAGTGGGAATATGCTCTCAGGTCCAGTTTCATTGTCCATTGGGAATTTAGTCAAGTTAGAGATGCTCAACCTTGATAAAAATAATCTTTCTGGGCCAATCCCTTCCACTATCGGAAAATTGGTAAATTTGGTTCAACTTGACCTTTATCAAAATAATCTTTCTGGGCCAATCCCTTCCACTATCGGAAAATTGGTAAATTTGGTTCAACTTGACCTTGGTGATAATAATTTTTCTGGGCCAATCCCTTCCACTATCGGAAAATTAGCAAATTTGGTTCGACTTGGCCTTGATGAAAATATACTCTCTGGAACAATCCCTTCCTCCATTGGAAACTTGACAAAACTGTTGGAACTAGTGTTATTGTCGAATGAACTTAGTGGTGAAATTCCAATAGAGTATAACAAGCTCACAGAATTGGAAAATCTCCAATTGAGTAATAATCATTTCAATTGGCAGTTGCCTCACAACATCTGTACAAGTGGAAATTTGGCTAAACTTTCAGCCGCAAATAACTACTTCACAGGTGTAGTTCCAAGTAGCTTAAAGAATTGCTCCAGCCTTGTAAGATTAAGGCTTGACGGAAACCAGATAACCGGAAATATAACTGAATCTTTTGGTGTATATCCAAATTTGGTCTACATTGATTTGAGTGACAATAATTTTCATGGCCATCTTTCATCAAAGTGGGGGAAATGTTCCAACCTGACGTGCCTCAAGATCTCCAACAATAATCTGTCGGGTCATATACCAACGGAACTAAGTGAAGCAACCAACTTGCAAGAACTTGACTTGTCTTCAAATCATCTTACGGGAGCAATTCCAAAAGAGCTTGGAAAGTTGACTTTGCTGATACAACTCTTGTTAAGCAACAACAGTTTTTCCGGAAATGTTCCCATTCAGATTTCATCATTGCAACAACTTGAAACGTTGGATCTTGCCAGGAACAATTTCAGAGGCCTCATCACAAAAGAACTTAGCATGTTGCCTAAGTTGTCCAACTTGAGTCTGAGCCAAAACGAATTTAATGGAACTATTCCTCTCGAGCTTGGGAATCTAAGATCCCTTCATGACTTTGATCTTGGTGACAATCTTTTAGATGGAAGCATTCCAGCATCACTTGGCCACTTGATGTTCTTAGAAAATTTGAACCTCTCTCATAACAATCTTTCTGGTGTCATTCCCTCAAGTTTTGATGGGATGTTAAGTTTGACAACTGTGGATATATCATATAACCAATTAGAAGGCCCACTTCCAAATATTCCAGCCTTCATAAAAGCTCCATTTGAAGCATTGAGAGATAATAAAGGTTTGTGTGGTAATGTCACTGGTATTGAGCCTTGTCCAGCGTCATCAACTGGTGATTCTCATAATGACCATAAAGCTAAGAAAGTTGTTGTGCTCATATTGGTCCTTTCTTTGGCCATCATAATAGCACTCTTAGTATTATGGGTATCATGCCGTGTATACCAAGGAACAGGCCGAAAGGAAAGCAATGCTACAGAGACGCAAACTCAAAATTTATTTGCAATTTGGAGCTATGATGGCAAGATGGTGTATGAAGAGATTATTGAGGCCACAGAAGATTTTGACAACAAATATCTCATTGGAGTTGGAGGCTTTGGATCTGTCTACCGAGCTGAGTTGTCCACCGGTCAAGTTGTTGCCGTGAAAAAACTTCATTCAATACCAAATGAAGAAGTTCCCAATCTCAAAACTTTCCAGAGTGAGATTCAAGCCTTGACAGAAATCCGTCATCGCAACATTGTGAAGCTATATGGATTCTGTTCTCATTCTCGGCACTCCTTTTTGGTTTATGAGATTATAGAAAGAGGTAGCATTGACAAGATTCTAGCGAATGATGAAGAAGCGGTTGAGTTTGATTGGAATAGGAGGGTGAATGCTGTTAAAGGAGTAGCTAATGCTTTATGCTACATGCACCATGATTGTTCACCTCCTATAGTGCATAGAGATATATCAGCAAAAAATGTTCTTCTGGATTTGGAACATGAGGCTCATGTGTCAGATTTTGGAGCATCTAAACTTCTTAATCCAAATTCATCAAATTGGACCTCTTTTGCAGGGACCTTTGGTTATGCAGCTCCAGAACTTGCTTACACTATGGAGGTGAATGAAAAATGTGATGTGTATAGCTTCGGGATATTAGCTTTGGAAATAATGTTGGGGAAGCATCCTGGAGATGCTGCATCATCATCTATGGTGATGATACCATCTTCAGAGACAATGGAATATGCATCAACACTTGATAATAAGTTTTTCTTAAAGGATAAGTTGGATCATCGTCTTCCTTACCCTACAAATCCAATTGCAGTAGAGATTATGCAAATTGTGAAGATAGCAAGTGCCTGTTTGACAGAAAATCCACGTTCTCGTCCTACCATGGAACAAGTGGTGAAAGATCTTGTGGTGGCAAACGCTTCAGTTTCAACAATGCATTAA 3519 0.3919 PIMLPFFPRLNPMKLLAMCCLLLMSVTTSMTTTSVAIQGNEEAYALLDWKASFEKQSQALLSSWNGSDPCHWVGIACDHSKSVSSLNFTKFGLRGTLQTLNFSSLPNIHTIAMSNNSFYGTIPKQIGVLSNLDTLDVHYNQFSGFIPKQIGSLSKLTVLDLGANNFLGNIPQETKHLSNLKYLSFAYNNNLRGSIPAEIGMLRNLTQLHFEHCNLTGSIPTTIGNLTNLSVLNLNINHLDGPIPREIGKLVNVKFLWLQTNELSGSIPREIGLMTNLYQLDFSDNNLSGCIPSTIGNLSNLVYLYLYINSLSGAIPDEIGNLYSLSTIQLSSNNLSGTIPPSTSSLVNLNSILLSGNMLSGPVSLSIGNLVKLEMLNLDKNNLSGPIPSTIGKLVNLVQLDLYQNNLSGPIPSTIGKLVNLVQLDLGDNNFSGPIPSTIGKLANLVRLGLDENILSGTIPSSIGNLTKLLELVLLSNELSGEIPIEYNKLTELENLQLSNNHFNWQLPHNICTSGNLAKLSAANNYFTGVVPSSLKNCSSLVRLRLDGNQITGNITESFGVYPNLVYIDLSDNNFHGHLSSKWGKCSNLTCLKISNNNLSGHIPTELSEATNLQELDLSSNHLTGAIPKELGKLTLLIQLLLSNNSFSGNVPIQISSLQQLETLDLARNNFRGLITKELSMLPKLSNLSLSQNEFNGTIPLELGNLRSLHDFDLGDNLLDGSIPASLGHLMFLENLNLSHNNLSGVIPSSFDGMLSLTTVDISYNQLEGPLPNIPAFIKAPFEALRDNKGLCGNVTGIEPCPASSTGDSHNDHKAKKVVVLILVLSLAIIIALLVLWVSCRVYQGTGRKESNATETQTQNLFAIWSYDGKMVYEEIIEATEDFDNKYLIGVGGFGSVYRAELSTGQVVAVKKLHSIPNEEVPNLKTFQSEIQALTEIRHRNIVKLYGFCSHSRHSFLVYEIIERGSIDKILANDEEAVEFDWNRRVNAVKGVANALCYMHHDCSPPIVHRDISAKNVLLDLEHEAHVSDFGASKLLNPNSSNWTSFAGTFGYAAPELAYTMEVNEKCDVYSFGILALEIMLGKHPGDAASSSMVMIPSSETMEYASTLDNKFFLKDKLDHRLPYPTNPIAVEIMQIVKIASACLTENPRSRPTMEQVVKDLVVANASVSTMH* 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2761 1172 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1007 1019 IPR008266 GO:0004672|GO:0006468
Amo04g2761 1172 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 182 340 - -
Amo04g2761 1172 SUPERFAMILY Protein kinase-like (PK-like) 863 1163 IPR011009 -
Amo04g2761 1172 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 182 340 - -
Amo04g2761 1172 Gene3D Transferase(Phosphotransferase) domain 1 962 1170 - -
Amo04g2761 1172 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 351 1167 - -
Amo04g2761 1172 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Amo04g2761 1172 Gene3D Ribonuclease Inhibitor 291 386 IPR032675 -
Amo04g2761 1172 Gene3D Ribonuclease Inhibitor 387 488 IPR032675 -
Amo04g2761 1172 SMART LRR_typ_2 658 681 IPR003591 -
Amo04g2761 1172 SMART LRR_typ_2 226 250 IPR003591 -
Amo04g2761 1172 SMART LRR_typ_2 730 753 IPR003591 -
Amo04g2761 1172 SMART LRR_typ_2 129 153 IPR003591 -
Amo04g2761 1172 SMART LRR_typ_2 418 442 IPR003591 -
Amo04g2761 1172 SMART LRR_typ_2 490 514 IPR003591 -
Amo04g2761 1172 SMART LRR_typ_2 274 298 IPR003591 -
Amo04g2761 1172 SMART LRR_typ_2 611 634 IPR003591 -
Amo04g2761 1172 SMART LRR_typ_2 370 394 IPR003591 -
Amo04g2761 1172 SMART LRR_typ_2 322 346 IPR003591 -
Amo04g2761 1172 SMART LRR_typ_2 682 706 IPR003591 -
Amo04g2761 1172 ProSiteProfiles Protein kinase domain profile. 883 1172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2761 1172 SUPERFAMILY L domain-like 71 387 - -
Amo04g2761 1172 ProSitePatterns Protein kinases ATP-binding region signature. 889 912 IPR017441 GO:0005524
Amo04g2761 1172 SUPERFAMILY L domain-like 391 479 - -
Amo04g2761 1172 Gene3D Phosphorylase Kinase; domain 1 843 960 - -
Amo04g2761 1172 Pfam Protein kinase domain 885 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2761 1172 Gene3D Ribonuclease Inhibitor 38 188 IPR032675 -
Amo04g2761 1172 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 18 182 - -
Amo04g2761 1172 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 351 1167 - -
Amo04g2761 1172 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 301 400 - -
Amo04g2761 1172 Gene3D Ribonuclease Inhibitor 189 290 IPR032675 -
Amo04g2761 1172 SUPERFAMILY RNI-like 458 769 - -
Amo04g2761 1172 Gene3D Ribonuclease Inhibitor 491 803 IPR032675 -
Amo04g2761 1172 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 301 400 - -
Amo04g2761 1172 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 18 182 - -
Amo04g2761 1172 Pfam Leucine rich repeat 155 215 IPR001611 GO:0005515
Amo04g2761 1172 Pfam Leucine rich repeat 372 431 IPR001611 GO:0005515
Amo04g2761 1172 Pfam Leucine rich repeat 563 623 IPR001611 GO:0005515
Amo04g2761 1172 Pfam Leucine rich repeat 707 767 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2761 Amo-Chr4 101026657 101030482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2761 21 652 Receptor kinase-like Gene Family AT4G08850 37.304 1.49e-109 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo04g2761 Pkinase 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2761 - - mtr:MTR_1g040615 1215.29