Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2757 ATGGTTTCTTTGTCAACAAACCCCTTCTTTTCTCTAACCACCCAAAACGCTGCGTCTCGTTCTTCTTCTTCTTTGTATTCGAGATTCGCGGCTTCAACCAAGTTCAATTCTTTCCACGCAAATAATAAAGATCATAGAAAGGTTGTTTGTGCTTGCGTCGCTCCTCCAACGAACTTCAAGAGCGAAGACTCTTCCGCGCTCAGATTCAATGGTTCATCGAAATCGGAGCAATTGAGCACACTTCGGGAACAAGATGGTGACTCTGATGTTCTTATTGAGTGTAGAGACGTCTACAAGTCATTTGGGGAAAAGAAAATCCTCAATGGTGTTAGCTTCAAGATTAGACATGGGGAAGCAGTTGGAATAATTGGTCCTTCTGGGACTGGAAAATCCACAGTTTTAAAGATTATTGCAGGATTACTTATTCCAGATAAGGGTGAAGTTTATATTCGAGGTAGAAAGAGAGTTGGTCTGGTAAGCGATGATGAGCTACATGGTCTTCGCATTGGATTAGTGTTCCAAAGTGCAGCACTTTTTGATTCTTTGACTGTCCGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGCATGCCTGAAGACCAGATATCAGAGGTTGTCAAGGAAACCTTGGCTGCTGTTGGATTGAAGGGAGTTGAGAATCGGTTGCCTTCTGAGTTATCAGGTGGAATGAAAAAACGAGTTGCTTTAGCTCGATCTATTATTTATGACAATTCAAAGGATTCAATTGAGCCTGAGGTTCTCTTATATGATGAACCAACTGCTGGACTAGATCCCATTGCATCAACTGTTGTTGAGGATCTAATTCGTTCAGTGCACATAAAAGGACAAGATGCACGTGGGAAACCCGGGAACATTGCATCATATGTGGTCGTCACTCACCAACATAGTACCATTAAAAGAGCCATTGACAGGTTGGTGTTTCTACACAAGGGAAAGATTGTTTGGGAAGGAATGACTCATGAATTTACAACATCAACAAATCCAATTGTTCAACAGTTTGCATCTGGGAGCCTGGAGGGTCCTATCAAATACTAG 1059 0.4174 MVSLSTNPFFSLTTQNAASRSSSSLYSRFAASTKFNSFHANNKDHRKVVCACVAPPTNFKSEDSSALRFNGSSKSEQLSTLREQDGDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLIPDKGEVYIRGRKRVGLVSDDELHGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMPEDQISEVVKETLAAVGLKGVENRLPSELSGGMKKRVALARSIIYDNSKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGQDARGKPGNIASYVVVTHQHSTIKRAIDRLVFLHKGKIVWEGMTHEFTTSTNPIVQQFASGSLEGPIKY* 353
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2757 352 Pfam ABC transporter 107 262 IPR003439 GO:0005524
Amo04g2757 352 ProSitePatterns ABC transporters family signature. 227 241 IPR017871 GO:0005524
Amo04g2757 352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 333 IPR027417 -
Amo04g2757 352 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 16 352 - -
Amo04g2757 352 Gene3D - 79 345 IPR027417 -
Amo04g2757 352 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 16 352 - -
Amo04g2757 352 SMART AAA_5 116 320 IPR003593 -
Amo04g2757 352 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 92 343 IPR003439 GO:0005524
Amo04g2757 352 CDD ABC_Org_Solvent_Resistant 92 341 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo04g2757 Amo-Chr4 100978987 100983725 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2757 98 336 Calmodulin-binding Proteins AT2G36910 28.800 9.75e-16 77.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2757 - - adu:107486109 673.7