Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2743 ATGTTACCCATGGCTTCCCATGTTGCTTTTCCTCATGCTTCTCCTCTTTCTCTCTCTATTCCCAACAAACGATTCAGTTACAAACAGCTTCACATAAATGGAATCAAATCCATCACTACTTTCTCTTCATCTTCTTATTATTCTTCTTCTTGTTGGTGCTTCCGTTCACTTTCTACACAAAGAGGGTATTGTTTACCTGTGATTGCATGTTCCTCTTCCAATGGAAGGGGCCCTAATAGTTCTAAGGACGATGATGGTGTCAAGAATGTTGAGAAGCTTCTTGAGGAGAAAAGAAGAGCTGAATTGTCTGCTAGGATTGCCTCAGGTGAATTCACAGTGAAGCAGCAATCTGGTTTAAGTTCTATGTTGAAGAAGAGCTTGTTAAAGGTGGGGTTGCCCAAAGAGGTTGTGGGGTTTTTGCTCGGTTGGGCGGCAGGGGAAGGTGATTACCCCGAAATTCCTGAGGCAAAAGGATCTGTCAAGGCTATTAGAAGTGAGGCATTCTTCATTCCATTGTATGAACTTTACCTCACATACGGTGGAATTTTCAGGTTGACTTTTGGACCAAAGTCCTTTTTGATTGTATCTGATCCGTCTATAGCAAAACACATCTTGAGAGACAATTCAAAGGCTTATTCGAAGGGTATCTTGGCTGAGATCCTAGAGTTTGTAATGGGGACAGGGCTCATCCCGGCTGATGGGGAAGTGTGGCGAGTTCGACGACGAGCTATAGTCCCAGCATTGCATCTGAAGTACGTAGTGGCAATGATTAGCCTTTTTGGACAAGCCACAGATAGGCTCTGCAAGAAGCTAGATGATGCTGCATCTGATGGGGAAGATGTTGAGATGGAATCACTTTTCTCTCGATTGACGTTGGACATCATTGGAAAGGCAGTATTCAATTATGATTTCGACAGTTTAACAAATGATACCGGTATAGTTGAGGCTGTATATACTGTACTGAGAGAAGCAGAAGATCGAAGCGTTTCTCCGATTCCAGTATGGGAGATCCCAATATGGAAAGACATATCACCGCGTCAAAGGAAGGTTTCTGCTGCTCTCAAATTGATCAATGATACACTTAATGAGCTGGTAGCAATATGCAAGAGAATGGTGGACGAAGAAGAGTTACAGTTTCACGAGGAGTACATGAATGAGCAAGATCCAAGTATTCTGCATTTCTTGTTGGCATCAGGAGATGATGTGTCGAGTAAGCAACTCCGCGATGATTTAATGACAATGCTCATTGCTGGACATGAAACTTCAGCTGCTGTTTTAACTTGGACCTTCCATCTTCTATCAAAGGTTGACTCTGTACTAGGGGATCGATTTCCAACTATCGAAGACATGAAGAAACTCCGATATACAACCCGAGTGATCAATGAGTCAATGAGGCTTTACCCTCAACCACCAGTGTTGATCCGTCGCTCTCTTGAGAATGATATGCTCGGCAAGTATCCTATAAAAAGAGGTGAAGATATCTTTATATCTGTCTGGAACCTGCATCGTAGTCCAAACCTATGGGATGAAGCTGATAAGTTTCAACCAGAAAGATGGCCAGTAGATGGACCTAACCCCAATGAGACAAATCAAAACTTCAAGTATCTTCCATTTGGGGGAGGACCGCGGAAATGTGTTGGTGATTTGTTTGCTTCATACGAGACCATAGTAGCACTTGCAATGCTTGTTAGACGGTTCAACTTTCAAATGGCAGTTGGAGCCCCACCAGTTGAGATGACTACTGGAGCAACAATTCATACAACACAAGGGTTGAAGATGACAGTTACACGCAGAATAAAACCTCCAATTGTGCCCTCGTTACAAATGTCAACCATGGAAATTGATCCATCCATGAGCAAAGATGACACAAGTCAGAAAGGCGAAGTTTATCAGGCTCAGTCCTAA 1905 0.4304 MLPMASHVAFPHASPLSLSIPNKRFSYKQLHINGIKSITTFSSSSYYSSSCWCFRSLSTQRGYCLPVIACSSSNGRGPNSSKDDDGVKNVEKLLEEKRRAELSARIASGEFTVKQQSGLSSMLKKSLLKVGLPKEVVGFLLGWAAGEGDYPEIPEAKGSVKAIRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGTGLIPADGEVWRVRRRAIVPALHLKYVVAMISLFGQATDRLCKKLDDAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVSAALKLINDTLNELVAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFHLLSKVDSVLGDRFPTIEDMKKLRYTTRVINESMRLYPQPPVLIRRSLENDMLGKYPIKRGEDIFISVWNLHRSPNLWDEADKFQPERWPVDGPNPNETNQNFKYLPFGGGPRKCVGDLFASYETIVALAMLVRRFNFQMAVGAPPVEMTTGATIHTTQGLKMTVTRRIKPPIVPSLQMSTMEIDPSMSKDDTSQKGEVYQAQS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2743 634 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 538 547 IPR017972 GO:0005506|GO:0016705
Amo04g2743 634 Gene3D Cytochrome P450 153 606 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2743 634 PRINTS P450 superfamily signature 417 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2743 634 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2743 634 PRINTS P450 superfamily signature 545 556 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2743 634 PRINTS P450 superfamily signature 536 545 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2743 634 Pfam Cytochrome P450 172 581 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2743 634 PANTHER - 105 602 - -
Amo04g2743 634 MobiDBLite consensus disorder prediction 611 634 - -
Amo04g2743 634 PRINTS E-class P450 group I signature 457 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2743 634 PRINTS E-class P450 group I signature 176 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2743 634 PRINTS E-class P450 group I signature 535 545 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2743 634 PRINTS E-class P450 group I signature 545 568 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2743 634 PRINTS E-class P450 group I signature 497 521 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2743 634 PRINTS E-class P450 group I signature 406 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo04g2743 634 PANTHER CYTOCHROME P450 FAMILY 4 105 602 - -
Amo04g2743 634 SUPERFAMILY Cytochrome P450 165 598 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2743 Amo-Chr4 100852671 100857212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2743 75 624 Cytochrome P450 AT1G31800 76.335 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2743 K15747 - gmx:100780770 1004.59