Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2740 ATGTTACCGGACGGAACCATAGTCGCCGTTAAGAGATCAAAAGAGATGGAAAGGAACCAGATACAGACTTTTGTCAATGAAGTTGTGATTCTATCACAGATTAACCACAGGAACATTGTTAAACTCTTGGGGTGTTGTCTTGAGACAGAAGCACCATTACTTGTCTATGAATTTATTCCAAATGGAACACTTTCTGACCATATTCATGTGAAAGAGGACGAGTCATCATCGCTTTCATGGGATGGCCGCCTTCAAATTGCTTGTGAGGTAGCTGGAGCAGTGGCCTATATGCATTCTGCAGCTTCTGTTCCTATCTTCCATAGAGACATCAAACCTTCAAACATACTCCTAGACAGCAACTACAGTGCTAAAGTTTCTGATTTTGGAACATCTAAATCACTTCCATTGGATAATACTCACTTGACAACTGCAGTAAGAGGAACTTTTGGGTACATAGATCCTGAGTATTTTCAGTCCAATCAATATACAGATAGAAGTGATGTGTATAGTTTCGGAGTTGTGCTTGTTGAGCTCATAACTGGGAGGAAACCACTTTCATTGTTACAAGATGAGGGTCAGCATCTGATAGCAGAATTCATTTCTCTGATGAAGGAGAACCAGCTTTCTGAAATTCTGGATGCCAAAGTGCTCAAGGAAGCAAGGGAAGATCACATTCTTGCCATTGCAAATCTTGCAATGAGATGCTTGAGACTCAGTGGGAAGAAAAGACCAACCATGAAAGAAGTTTCAGCAGAACTAGAAGCATTGAGAACAGCAAAGAGTTCCGTACTTATCGACCTTGACCACATCTCGCCTGAAGATGGTGGATCACCTAGCCACACCACCAGGGGACCAATTCAAGAATCTGGAGAGGAAAGCATTTTGGTATCCCTACAAATGGAGTCCACATCCTTCTAA 918 0.4194 MLPDGTIVAVKRSKEMERNQIQTFVNEVVILSQINHRNIVKLLGCCLETEAPLLVYEFIPNGTLSDHIHVKEDESSSLSWDGRLQIACEVAGAVAYMHSAASVPIFHRDIKPSNILLDSNYSAKVSDFGTSKSLPLDNTHLTTAVRGTFGYIDPEYFQSNQYTDRSDVYSFGVVLVELITGRKPLSLLQDEGQHLIAEFISLMKENQLSEILDAKVLKEAREDHILAIANLAMRCLRLSGKKRPTMKEVSAELEALRTAKSSVLIDLDHISPEDGGSPSHTTRGPIQESGEESILVSLQMESTSF* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2740 305 MobiDBLite consensus disorder prediction 268 293 - -
Amo04g2740 305 ProSiteProfiles Protein kinase domain profile. 1 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2740 305 Gene3D Transferase(Phosphotransferase) domain 1 59 266 - -
Amo04g2740 305 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 285 IPR045274 GO:0007166
Amo04g2740 305 PANTHER LYSM TYPE RECEPTOR KINASE 1 285 - -
Amo04g2740 305 Gene3D Phosphorylase Kinase; domain 1 1 58 - -
Amo04g2740 305 SMART serkin_6 1 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2740 305 Pfam Protein kinase domain 4 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2740 305 PIRSF ILK 4 263 - -
Amo04g2740 305 MobiDBLite consensus disorder prediction 275 293 - -
Amo04g2740 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
Amo04g2740 305 SUPERFAMILY Protein kinase-like (PK-like) 4 253 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2740 Amo-Chr4 100831953 100833532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2740 1 259 Receptor kinase-like Gene Family AT1G79670 59.231 1.78e-109 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo04g2740 Pkinase 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2740 - - gmx:100792803 455.292