Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2739 ATGGAGCTTCACTACTATCTCTACATTCTCTCAATAAACCTATGCTTCTTGTTATTGTTACCTGAATCACTCTATTCACAACAAGTGTACCTAAATGGAACAGTTTATGATTGCACTGATACCCCTTCTACACCAAAAGGGTACCTTTGCAATGGCCTCAAGAAATCATGCACTTCATTCATTGTTTTCAGGTCCAAACACCCTTATGATAACCCTGCAAGCATTGCATACCTTCTTGACTCTGAAGCATCAATCATAGCCTCAATCAACAAGCTCTCAAACAATGCAAGAATCCCTTCTAACAGACCCATCATTGTTCCTGTTTTCTGTTCATGTCATGGAAATATCTATAGCCATGATGCTCCTTACACTGTCAAGAACAATGACACATACTTTGAATTGGTAAAAACAACTTACCAAGGACTAACAACATGCCAAGCATTGATGGGGCAGAACTACTATCCCCCTAATGGACTTCCAATTGGTGCTGAACTCACAGTTCCTTTGTTATGTGCTTGTCCAACAGAAAATCAAACTTCAACCGGTGTCACTTCCTTATTGGTTGATTTGATCAACTATGGTGACACCTTGAAGTCCATAGGAGAATCTTATGGTGTTGGTGAACAAAGTATGTTAGAGGCTAATAAGCCACAAAGTAAAAATAGTAGCAGCTTCACCCTCTTGGCCTTGACTCCTATCTTGGTTCCTCTAAGAGGAAAGAATTGCAAAGAGGATCCAAATAGTTTCTATTGTAACTGTTCTAAGGAATTCCTTGCTGATGGAAGCTTAAAGGGGATTTATTGTGATGAGTCTGATGGTCAAAAATTCCCTGCCAAATTGGTTGTTTGCATTGGTGTTGGCATTGGTGTAGGTTTTCTTTGTTTCTTTCTCTTGGGTTATAAACTATACCAATACATACAGAAAAAGAGAGAAAGGATTCGCAAAGAAAAGCTATTCAAACAGAATGGTGGCTACTTGTTACAAGAGAAAGTGTCATCATCACATGGAAATGGATCCCAAAAGGTAATAATAAAGCTTTTCACAGCTGAGGAGCTTCAAAGAGCAACAGATAACTACAACTGGAGCAGGTTTCTTGGTCAAGGTGGATATGGAAAAGTCTACAAAGGAATGCTACCAGATGGAACCATAGTAGCTGTTAAGAGATCTAAGGAGATTGAGAGGAACCAGATTGAGACTTTCGTCAATGAAGTTGTCATTTTATCACAGATTAATCACAGGAACATTGTGAAGCTCTTGGGGTGCTGTCTTGAGACAGAAGCACCATTACTAGTCTATGAGTTCATTCCAAATGGAACACTTGCACAACATATTCATAGCAAACCCCATGAATCATCTTCACCACTTTCATGGGATAGCCGGCTTCGAATTGCATGCGAGGTAGCTGGAGCAGTGGCCTATATGCATTCTTCAGCTTCAATTCCCATCTTCCATAGAGATATCAAACCTACTAACATACTCTTAGATAGTAACTATAGTGCAAAAGTGTCTGATTTTGGAACATCAAGATCATTGCCACAAGACAAGACTCACTTGACAACACAAATAGGAGGAACTTTCGGATACATCGACCCTGAATATTTCCAATCTAGTCAATTTTCGGATAAGAGTGACGTATATAGTTTTGGAGTTGTGCTTGTCGAAATCATAACTGGGAAGAAGCCGATTTCGTTTATAGAAGAAGATGAGGGTCAGAATTTGATTGCTGAATTCATTTCTGTGATGAAGGAGAACAAAGTTTGTGATATCTTGGATCCCAAGGTATTGAAGGAAGCTAAGAATGATGAGATTATTGCAATTTCAAATCTTGCAATGAGGTGTTTGAGGCTAAATGGGAAAAAAAGGCCAACAATGAAAGAGGTTTCAGCTGAGTTGGAATCATTGAGGAAGGTACAAAGTTCCATGTTGGTTGATAACCATGATCATCATCATGATGAATCAACAAACAATGATGAAAAATTATCGCATAAACACAACAATAGTTTAGTACAAGAATATGCAGAGGAGAGCATTTTGCTGTCATTACAATTACAAATGGAGTCCTCATCCTTCTAA 2073 0.3874 MELHYYLYILSINLCFLLLLPESLYSQQVYLNGTVYDCTDTPSTPKGYLCNGLKKSCTSFIVFRSKHPYDNPASIAYLLDSEASIIASINKLSNNARIPSNRPIIVPVFCSCHGNIYSHDAPYTVKNNDTYFELVKTTYQGLTTCQALMGQNYYPPNGLPIGAELTVPLLCACPTENQTSTGVTSLLVDLINYGDTLKSIGESYGVGEQSMLEANKPQSKNSSSFTLLALTPILVPLRGKNCKEDPNSFYCNCSKEFLADGSLKGIYCDESDGQKFPAKLVVCIGVGIGVGFLCFFLLGYKLYQYIQKKRERIRKEKLFKQNGGYLLQEKVSSSHGNGSQKVIIKLFTAEELQRATDNYNWSRFLGQGGYGKVYKGMLPDGTIVAVKRSKEIERNQIETFVNEVVILSQINHRNIVKLLGCCLETEAPLLVYEFIPNGTLAQHIHSKPHESSSPLSWDSRLRIACEVAGAVAYMHSSASIPIFHRDIKPTNILLDSNYSAKVSDFGTSRSLPQDKTHLTTQIGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLVEIITGKKPISFIEEDEGQNLIAEFISVMKENKVCDILDPKVLKEAKNDEIIAISNLAMRCLRLNGKKRPTMKEVSAELESLRKVQSSMLVDNHDHHHDESTNNDEKLSHKHNNSLVQEYAEESILLSLQLQMESSSF* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2739 690 ProSiteProfiles Protein kinase domain profile. 359 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2739 690 SUPERFAMILY Protein kinase-like (PK-like) 338 631 IPR011009 -
Amo04g2739 690 Gene3D Transferase(Phosphotransferase) domain 1 435 660 - -
Amo04g2739 690 CDD STKc_IRAK 365 634 - -
Amo04g2739 690 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 662 IPR045274 GO:0007166
Amo04g2739 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Amo04g2739 690 SMART serkin_6 359 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2739 690 Pfam Protein kinase domain 361 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo04g2739 690 Gene3D Phosphorylase Kinase; domain 1 326 434 - -
Amo04g2739 690 Pfam LysM domain 193 220 IPR018392 -
Amo04g2739 690 PANTHER LYSM TYPE RECEPTOR KINASE 27 662 - -
Amo04g2739 690 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2739 Amo-Chr4 100828067 100830467 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2739 275 635 Receptor kinase-like Gene Family AT1G16130 55.801 7.16e-140 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo04g2739 Pkinase 3.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2739 - - gmx:100795455 959.903