Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2685 ATGTTCCGAGGGTTACCTGAAACTGGAGGTCGATCTCGGACGAGATCTTTTGTACTGGTCGGAGATGACGTGTCCGGCTGGCTGGGTGGCCGGAGCTGTTGTTGCAACCAGTTGTCCCCACCTGTGGAGCATCGGGCCTTCACCCTCGAAGAGGATGACACCATAATCAGAGCTCACACTCGGTTCGGCAACAAGTGGGCCACCATAGCCCGACTCCTTTCCGGCAGAACCGACAATGCCATTAAGAACCACTGGAACTCCACCCTCAAACGCAAGTGCGCCTCCACGGGCCCCATCGACGATCCTCACTTCGCGCAGCCACTCAAACGCTCCGTCAGCACCAGTGCCGCCGTACTCGTGTCAACGGTGGTGGTGAGGTACTTGTTGCCGACGGTGATGGCGACGACGGAGGTGGCGGGCCGTGGTCCAACTCATCCATGCCCTTCACCACTTTGA 456 0.5899 MFRGLPETGGRSRTRSFVLVGDDVSGWLGGRSCCCNQLSPPVEHRAFTLEEDDTIIRAHTRFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASTGPIDDPHFAQPLKRSVSTSAAVLVSTVVVRYLLPTVMATTEVAGRGPTHPCPSPL* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2685 151 Pfam Myb-like DNA-binding domain 46 88 IPR001005 -
Amo04g2685 151 PANTHER MYB PROTEIN-RELATED 30 118 - -
Amo04g2685 151 SUPERFAMILY Homeodomain-like 34 93 IPR009057 -
Amo04g2685 151 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 93 IPR017930 -
Amo04g2685 151 SMART sant 43 91 IPR001005 -
Amo04g2685 151 CDD SANT 46 89 IPR001005 -
Amo04g2685 151 Gene3D - 46 112 - -
Amo04g2685 151 PANTHER TRANSCRIPTION FACTOR MYB73 30 118 - -
Amo04g2685 151 ProSiteProfiles Myb-like domain profile. 39 89 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2685 Amo-Chr4 100026723 100028662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2685 15 118 MYB Transcription Factor Family AT4G37260 57.143 5.43e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo04g2685 Myb_DNA-binding 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2685 K09422 - aip:107641435 219.55