Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2655 ATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTGCAGGTTTCTCTACAAGAGTTCGGTGCACAAATAGGAAGGGAAACGAGATTAAGAATCAACTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCAACCGAGAAGACCAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGCAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACAATAGAGAATAACGAGGAGGCCGTTGCAGCCGAGGTAAAATGCCAATGCTTATTATTCGAGTCGAGAGGGATACTGTGCCGTCACGCACTAAGCGTGTTAAGCTTCGAACAAGTAAGCCAAGTGTCACCTAGATATATACTGGAACGATGGAGCAAGAAGGTAAAGAGGCGACACACACACATCAAGAGCAGCCACGACGAGCCACTAATGGAGCCAAGAAGCAAGAGGTTCGACCAATTGGTTTTTCGTTCGCAAAATATTTGCGAATTTGCCTCCGAATCGGAGGAGCTGACTGCAATTCTGCACCGTGCGTACGATAACGTCATGGCCGAGATGGAATCATTAAAAGCCAAAAGGAAGGGGACATCTTCTTTATCCCACGAAGACGCCAACTTGGAATCCGTTAACGAGCTTCAAAGCCCGCCAAGGATTCGAACAAGAGGACGTCCAAAAAACAGGCTAGATAAACCTGTTTGA 825 0.4582 MTFTTLEDAGKFYRNYAKAAGFSTRVRCTNRKGNEIKNQLITCSREGKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSIRRTIENNEEAVAAEVKCQCLLFESRGILCRHALSVLSFEQVSQVSPRYILERWSKKVKRRHTHIKSSHDEPLMEPRSKRFDQLVFRSQNICEFASESEELTAILHRAYDNVMAEMESLKAKRKGTSSLSHEDANLESVNELQSPPRIRTRGRPKNRLDKPV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2655 274 MobiDBLite consensus disorder prediction 234 274 - -
Amo04g2655 274 Pfam SWIM zinc finger 124 150 IPR007527 GO:0008270
Amo04g2655 274 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
Amo04g2655 274 PANTHER OS03G0843700 PROTEIN 1 108 - -
Amo04g2655 274 SMART 26again6 128 155 IPR006564 GO:0008270
Amo04g2655 274 PANTHER OS03G0843700 PROTEIN 125 226 - -
Amo04g2655 274 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 125 226 IPR031052 GO:0006355
Amo04g2655 274 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 108 IPR031052 GO:0006355
Amo04g2655 274 ProSiteProfiles Zinc finger SWIM-type profile. 115 153 IPR007527 GO:0008270
Amo04g2655 274 MobiDBLite consensus disorder prediction 243 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2655 Amo-Chr4 99653024 99655382 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo04g2655 FAR1 5.4e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2655 - - adu:110280503 290.041