Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2647 ATGGGAACTGGTGGTGGCGCACCTTCCTCCTCCTCCGCCTCTTCCGGCTGGTCCGGTTTCTGGTCGTCGGCGCTCCGATCAAAGCGCCTTGTCTCTCCGGCGGAGAAGGCGGCCGCTGAAAGCAACGGCCGGGGACTCTCCCGCCGCCTTGGAGTCCTCGACCTAGTCCTCCTCGGGATCGGTGCTTCCATCGGCGCCGGCATATTCGTCGTCACCGGTACCGTCGCCCGTGACGCTGGACCCGGAGTAACAATCAGTTTTATACTTGCCGGAGCATCATGCGTTGTAAATGCACTCTGTTATGCCGAGCTAGCTTCTCGTTTCCCTGCTGTTGTCGGAGGAGCGTATCTATACACATACACGGCCTTTAATGAGATCACTGCTTTCCTTGTTTTTGCACAATTAATGCTTGACTATCATATTGGAGCAGCTAGCATAGCAAGAAGCCTGGCAAGCTATGTGGTGTCAATTCTAGAGCTCTTCCCTGTGTTGAARGATAACATTCCAGACTGGATTGGACATGGTCAGRACATTGGGGAAGTTCTGTCCATCAATGTCTTGGCTCCAATTCTCCTAATTCTTCTCACTCTGATTCTTTGCTGGGGTGTTGGAGAATCWTCGGCTGTGAATGCATTCATGACAGTGACCAAGATAGTCATTGTTATAGTTGTCGTTCTTGTTGGAGCTTTTGAGGTTGATGTTTCYAACTGGTCTCCCTTTGCTCCGAATGGCATAAAAAGCATATTTACTGGAGCTACTGTAGTCTTCTTTGCTTATGTTGGATTTGATGCAGTTGCCAATTCTGCCGAAGAATCTAAGAGACCGCAGCGGGATTTGCCAATAGGCATAATTGGAAGCCTCTTAGTATGTATTGCATTGTATATTGGAGTATGCTTAGTTATTACGGGGATGGTCCCATACATGTATCTTGGAGAAGATGCTCCTTTGGCTGAAGCTTTTACATCWAAAGGATTAAAATTTGTMTCTGTTCTGATTAGTRTTGGTGCCATTGCTGGACTTACAACAACACTCCTTGTTGGTCTCTACGTTCAGTCTCGGTTGTATCTCGGGCTTGGCAGGGATGGTTTACTACCCTCGATATTTGCCAGAGTTAACTCCAAACGGCACACTCCTATTCATTCACAGGTCTGGGTTGGATGTGTTGCCAGTGTTTTGGCTGGACTATTGAAYGTAACAATGCTTTCACACATTCTCTCTGTTGGTACACTGACTGGCTACTCAGTTGTCTCGGCATGTGTTGTAGTACTTCGGTGGAAAGATAGGACAAATAGTCAATTATCAATTTCAGCTAAGCAGGAGGGTGTAATTTGCCTCGTTGCTATTGCTGCTTGTGGATTCGCTACTGGGCTCTTATTCCGTTATGATGCTTCGCCTATTTTTATGATTCTAGCTATACTTGTTGCAGTAGGTGCTTCTGCTGCTCTTCTTATCCGCCAGGCTTATTCAGATGCACCAGGATTTTCTTGCCCTGGAGTTCCCCTTCTGCCATGCCTTTGCATCTTTTTTAATATATTCTTATTTGCTCAGTTACATCATGAAGCGTGGGTGAGATTTGTGGTTCTAAGTCTTGTCATGGTTGGTGTTTATGCCATCTATGGCCAGTATCATGCTGATCCCAATGCAGCAGATACCATCATGTATCACCGGGCACCAGAGGATGAAGCTCAATGA 1692 0.4669 MGTGGGAPSSSSASSGWSGFWSSALRSKRLVSPAEKAAAESNGRGLSRRLGVLDLVLLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVVNALCYAELASRFPAVVGGAYLYTYTAFNEITAFLVFAQLMLDYHIGAASIARSLASYVVSILELFPVLKDNIPDWIGHGQXIGEVLSINVLAPILLILLTLILCWGVGESSAVNAFMTVTKIVIVIVVVLVGAFEVDVSNWSPFAPNGIKSIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYMYLGEDAPLAEAFTSKGLKFVSVLISXGAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFARVNSKRHTPIHSQVWVGCVASVLAGLLNVTMLSHILSVGTLTGYSVVSACVVVLRWKDRTNSQLSISAKQEGVICLVAIAACGFATGLLFRYDASPIFMILAILVAVGASAALLIRQAYSDAPGFSCPGVPLLPCLCIFFNIFLFAQLHHEAWVRFVVLSLVMVGVYAIYGQYHADPNAADTIMYHRAPEDEAQ* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2647 563 PANTHER CATIONIC AMINO ACID TRANSPORTER 9-RELATED 12 562 - -
Amo04g2647 563 PIRSF AA_transporter 34 495 - -
Amo04g2647 563 PIRSF AA_transporter 442 563 - -
Amo04g2647 563 Pfam C-terminus of AA_permease 494 543 IPR029485 -
Amo04g2647 563 Gene3D Amino acid/polyamine transporter I 46 478 - -
Amo04g2647 563 Pfam Amino acid permease 50 459 IPR002293 GO:0016020|GO:0022857|GO:0055085
Amo04g2647 563 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 12 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2647 Amo-Chr4 99567245 99571404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g2647 1 489 Organic Solute Cotransporters AT1G05940 71.111 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2647 K03294 - gmx:100804988 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3572 14 139766359 139770584 Amo04g2647 04 99567245 99571404 hybridization
Amo05g4579 05 118446498 118448658 Amo04g2647 04 99567245 99571404 PCT
Amo15g1582 15 113142210 113144569 Amo04g2647 04 99567245 99571404 PCT